Assay Details
Target Gene Details
Entrez Gene ID: | 11277 |
Gene Name: | three prime repair exonuclease 1 |
Gene Aliases: |
AGS1, CRV, DRN3, HERNS |
Location: |
Chr.3:48465520-48467645 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TREX1 | NM_007248.3 | 2 | 962 | NP_009179.2 |
NM_016381.5 | 1 | 1460 | NP_057465.1 | |
NM_033629.4 | 2 | 1140 | NP_338599.1 | |
AF151105.3 | 1 | 1117 | AAD48774.2 | |
AJ243797.1 | 2 | 550 | CAB50866.1 | |
AK315196.1 | 1 | 750 | ||
AL137745.1 | 1 | 1460 | ||
BC023630.1 | 1 | 706 | AAH23630.1 | |
BQ933154.1 | 2 | 794 | ||
BT020052.1 | 1 | 294 | AAV38855.1 | |
BT020053.1 | 1 | 294 | AAV38856.1 | |
CR457119.1 | 1 | 294 | CAG33400.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv834684 | Chr.3:48344209 - 48551890 on Build GRCh38 | Gain | FBXW12 TMA7 PFKFB4 MIR6823 CCDC51 ATRIP PLXNB1 SHISA5 TREX1 |
dgv8315n54 | Chr.3:48464432 - 48478412 on Build GRCh38 | Loss | ATRIP SHISA5 TREX1 |
nsv590242 | Chr.3:48392157 - 48518906 on Build GRCh38 | Loss | FBXW12 TMA7 PFKFB4 CCDC51 ATRIP PLXNB1 SHISA5 TREX1 |
nsv508917 | Chr.3:48400224 - 48499357 on Build GRCh38 | Insertion | TMA7 CCDC51 ATRIP PLXNB1 SHISA5 TREX1 |