Hs01020720_cn

• Gene Symbol: CHD5
• Assay Reference Genome Location: Chr.1:6105271 on build GRCh38
• Cytoband: 1p36.31

Target Gene Details

• Entrez Gene ID: 26038
• Gene Name: chromodomain helicase DNA binding protein 5
• Gene Aliases: CHD-5
• Location: Chr.1:6101787-6180134 on Build GRCh38
• Assay Gene Location: Within Exon 42

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CHD5	NM_015557.2	42	6179	NP_056372.1
	AB007913.1	24	3140	BAA32289.1
	AF425231.1	42	6168	AAL98962.1
	AK091386.1
	AK126012.1	21	2856	BAC86391.1
	AK127046.1	34	4786	BAC86802.1
	AL110281.1	31	4207	CAH56404.1
	AL117491.1	32	4372	CAB55959.1
	AL137693.1	31	4185	CAH56377.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv470689	Chr.1:6089062 - 6173513 on Build GRCh38	Loss	CHD5 KCNAB2
nsv461283	Chr.1:6048317 - 6124032 on Build GRCh38	Loss	CHD5 KCNAB2
nsv545232	Chr.1:6104348 - 6108362 on Build GRCh38	Gain	CHD5
dgv75n54	Chr.1:6081265 - 6144206 on Build GRCh38	Loss	CHD5 KCNAB2

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
negative regulation of cell proliferation
cerebral cortex neuron differentiation
spermatogenesis, exchange of chromosomal proteins
histone H4 acetylation
regulation of transcription involved in cell fate commitment
histone H3-K27 trimethylation
positive regulation of signal transduction by p53 class mediator

Function(s)

DNA binding
ATP binding
ATP-dependent helicase activity
zinc ion binding
H3K27me3 modified histone binding