Assay Details
Target Gene Details
Entrez Gene ID: | 9582 |
Gene Name: | apolipoprotein B mRNA editing enzyme catalytic subunit 3B |
Gene Aliases: |
A3B, APOBEC1L, ARCD3, ARP4, DJ742C19.2, PHRBNL, bK150C2.2 |
Location: |
Chr.22:38982399-38992779 on Build GRCh38 |
Assay Gene Location: | Within Exon 8 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
APOBEC3B | NM_001270411.1 | 8 | 1319 | NP_001257340.1 |
NM_004900.4 | 8 | 1394 | NP_004891.4 | |
AK024854.1 | 7 | 1674 | ||
BC053859.1 | 7 | 1266 | AAH53859.1 | |
BX114955.1 | 3 | 432 | ||
U61083.1 | 5 | 842 | AAD00089.1 | |
U61084.1 | 8 | 1383 | AAD00090.1 |
Target Gene Details
Entrez Gene ID: | 100874530 |
Gene Name: | APOBEC3B antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.22:38991559-38998220 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 3 - Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
APOBEC3B-AS1 | NR_104187.1 | |||
CX754295.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv3627 | Chr.22:38952080 - 39000579 on Build GRCh38 | Deletion | APOBEC3A APOBEC3B-AS1 APOBEC3B |
dgv770n67 | Chr.22:38960228 - 38992577 on Build GRCh38 | Loss | APOBEC3A APOBEC3B-AS1 APOBEC3B |
nsv1056597 | Chr.22:38950674 - 38993688 on Build GRCh38 | Loss | APOBEC3A APOBEC3B-AS1 APOBEC3B |
esv3568392 | Chr.22:38954272 - 38993687 on Build GRCh38 | Loss | APOBEC3A APOBEC3B-AS1 APOBEC3B |
nsv198 | Chr.22:38954302 - 39000579 on Build GRCh38 | Deletion | APOBEC3A APOBEC3B-AS1 APOBEC3B |
esv2495318 | Chr.22:38961921 - 38993162 on Build GRCh38 | Deletion | APOBEC3A APOBEC3B-AS1 APOBEC3B |
esv33846 | Chr.22:38963046 - 38995927 on Build GRCh38 | Gain+Loss | APOBEC3A APOBEC3B-AS1 APOBEC3B |
esv3584501 | Chr.22:38967614 - 38993700 on Build GRCh38 | Gain | APOBEC3B-AS1 APOBEC3B |
dgv4571n100 | Chr.22:38967602 - 39003295 on Build GRCh38 | Loss | APOBEC3B-AS1 APOBEC3B |
esv28999 | Chr.22:38959802 - 38996495 on Build GRCh38 | Loss | APOBEC3A APOBEC3B-AS1 APOBEC3B |
esv2760711 | Chr.22:38955461 - 39003307 on Build GRCh38 | Loss | APOBEC3A APOBEC3B-AS1 APOBEC3B |
dgv172n111 | Chr.22:38947911 - 39007789 on Build GRCh38 | Deletion | APOBEC3A APOBEC3B-AS1 APOBEC3B |
nsv482077 | Chr.22:38982400 - 38992778 on Build GRCh38 | Gain | APOBEC3B-AS1 APOBEC3B |
nsv9908 | Chr.22:38990517 - 38995926 on Build GRCh38 | Loss | APOBEC3B-AS1 APOBEC3B |
dgv833e199 | Chr.22:38960540 - 38993337 on Build GRCh38 | Deletion | APOBEC3A APOBEC3B-AS1 APOBEC3B |
More Information
Set Membership: |
Intragenic Exonic Non-exonic DGV Variation |