Hs00999795_cn

• Gene Symbol: CTNNA1
• Assay Reference Genome Location: Chr.5:138753474 on build GRCh38
• Cytoband: 5q31.2

Target Gene Details

• Entrez Gene ID: 1495
• Gene Name: catenin alpha 1
• Gene Aliases: CAP102, MDPT2
• Location: Chr.5:138753386-138935034 on Build GRCh38
• Assay Gene Location: Overlaps Exon 1 - Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CTNNA1	NM_001290307.2			NP_001277236.1
	NM_001290309.2			NP_001277238.1
	NM_001290310.2			NP_001277239.1
	NM_001323982.1			NP_001310911.1
	NM_001323984.1			NP_001310913.1
	NM_001323985.1			NP_001310914.1
	NM_001323986.1			NP_001310915.1
	NM_001903.4			NP_001894.2
	AK094151.1
	AK296708.1
	AK300439.1
	AK304267.1
	AU141929.2
	BC000385.2			AAH00385.1
	D13866.1			BAA02979.1
	D14705.1			BAA03530.1
	DC332608.1
	DC369291.1

Target Gene Details

• Entrez Gene ID: 105379194
• Gene Name: uncharacterized LOC105379194
• Gene Aliases: -
• Location: Chr.5:138744430-138753924 on Build GRCh38
• Assay Gene Location: Overlaps Intron 1 - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC105379194	NR_134244.1
	HY038745.1
	HY224594.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1074873	Chr.5:138753010 - 138753911 on Build GRCh38	Deletion	CTNNA1 LOC105379194

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

non-motor actin binding protein

Gene Ontology Categories:

Process(es)

ovarian follicle development
actin filament organization
cell adhesion
establishment or maintenance of cell polarity
negative regulation of neuroblast proliferation
aging
male gonad development
gap junction assembly
axon regeneration
adherens junction organization
cellular protein localization
odontogenesis of dentin-containing tooth
apical junction assembly
response to estrogen
positive regulation of smoothened signaling pathway
positive regulation of muscle cell differentiation
protein heterooligomerization
cellular response to indole-3-methanol
epithelial cell-cell adhesion
negative regulation of cell motility
negative regulation of integrin-mediated signaling pathway
negative regulation of extrinsic apoptotic signaling pathway in absence of ligand
positive regulation of extrinsic apoptotic signaling pathway in absence of ligand

Function(s)

structural molecule activity
protein binding
beta-catenin binding
vinculin binding
poly(A) RNA binding
gamma-catenin binding
cadherin binding
actin filament binding
cadherin binding involved in cell-cell adhesion