Assay Details
Target Gene Details
Entrez Gene ID: | 56114 |
Gene Name: | protocadherin gamma subfamily A, 1 |
Gene Aliases: |
PCDH-GAMMA-A1 |
Location: |
Chr.5:141330685-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA1 | NM_018912.2 | NP_061735.1 | ||
AF152318.1 | AAD43712.1 |
Target Gene Details
Entrez Gene ID: | 56113 |
Gene Name: | protocadherin gamma subfamily A, 2 |
Gene Aliases: |
PCDH-GAMMA-A2 |
Location: |
Chr.5:141338760-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA2 | NM_018915.3 | NP_061738.1 | ||
AF152322.1 | AAD43716.1 |
Target Gene Details
Entrez Gene ID: | 56112 |
Gene Name: | protocadherin gamma subfamily A, 3 |
Gene Aliases: |
PCDH-GAMMA-A3 |
Location: |
Chr.5:141344034-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA3 | NM_018916.3 | NP_061739.2 | ||
AB208927.1 | BAD92164.1 | |||
AF152323.1 | AAD43717.1 |
Target Gene Details
Entrez Gene ID: | 56111 |
Gene Name: | protocadherin gamma subfamily A, 4 |
Gene Aliases: |
PCDH-GAMMA-A4 |
Location: |
Chr.5:141355025-141512979 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA4 | NM_018917.3 | 1 | 959 | NP_061740.2 |
NM_032053.2 | 1 | 959 | NP_114442.2 | |
AF152324.1 | 1 | 783 | AAD43718.1 | |
AF152511.1 | 1 | 783 | AAD43771.1 |
Target Gene Details
Entrez Gene ID: | 56104 |
Gene Name: | protocadherin gamma subfamily B, 1 |
Gene Aliases: |
PCDH-GAMMA-B1 |
Location: |
Chr.5:141350261-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB1 | NM_018922.2 | NP_061745.1 | ||
AF152330.1 | AAD43724.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759382 | Chr.5:140777355 - 141449115 on Build GRCh38 | Gain | PCDHB15 PCDHGA3 PCDHB3 PCDHGB6 PCDHGA9 PCDHGB1 SLC25A2 PCDHA10 PCDHGA10 PCDHGA12 PCDHA4 PCDHB9 PCDHGA6 PCDHAC1 PCDHGB7 PCDHB8 PCDHB10 PCDHB12 PCDHGA11 TAF7 PCDHA2 PCDHGA8 PCDHA9 PCDHB14 PCDHB1 PCDHB2 PCDHB7 PCDHB19P PCDHGB8P PCDHB16 PCDHGA2 PCDHA1 PCDHA8 PCDHB18P PCDHB4 PCDHAC2 PCDHA6 PCDHA12 PCDHGA1 PCDHA5 PCDHGB2 PCDHA11 PCDHA3 PCDHB5 PCDHGB4 PCDHB13 PCDHB17P PCDHGA7 PCDHA13 PCDHGB3 PCDHGA4 PCDHGB5 LOC101926905 PCDHB11 PCDHA7 PCDHGA5 PCDHB6 |
esv3606982 | Chr.5:141352280 - 141361411 on Build GRCh38 | Loss | PCDHGA3 PCDHGA1 PCDHGA2 PCDHGA4 PCDHGB2 PCDHGB1 |
nsv599922 | Chr.5:141341879 - 141416532 on Build GRCh38 | Loss | PCDHGA6 PCDHGA3 PCDHGB4 PCDHGA2 PCDHGB6 PCDHGA9 PCDHGB1 PCDHGA8 PCDHGA7 PCDHGA1 PCDHGB3 PCDHGA4 PCDHGB5 PCDHGA10 PCDHGB2 PCDHGA5 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |