Assay Details
Target Gene Details
Entrez Gene ID: | 51149 |
Gene Name: | chromosome 5 open reading frame 45 |
Gene Aliases: |
- |
Location: |
Chr.5:179837266-179858840 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 6 - Exon 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
C5orf45 | NM_001017987.2 | NP_001017987.1 | ||
NM_016175.3 | NP_057259.2 | |||
AF153685.1 | AAD51611.1 | |||
AK293901.1 | ||||
AK298954.1 | ||||
BC002739.2 | AAH02739.2 | |||
BC069051.1 | AAH69051.1 | |||
BF965313.1 | ||||
BQ642639.1 | ||||
BX537968.1 | CAD97932.1 | |||
BX647375.1 | 6 | 3534 | ||
CR936785.1 | 6 | 1712 |
Target Gene Details
Entrez Gene ID: | 8878 |
Gene Name: | sequestosome 1 |
Gene Aliases: |
A170, FTDALS3, OSIL, PDB3, ZIP3, p60, p62, p62B |
Location: |
Chr.5:179806388-179838078 on Build GRCh38 |
Assay Gene Location: | Within Exon 13 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SQSTM1 | NM_001142298.1 | 9 | 2725 | NP_001135770.1 |
NM_001142299.1 | 9 | 2642 | NP_001135771.1 | |
NM_003900.4 | 8 | 2712 | NP_003891.1 | |
AI333228.1 | 1 | 189 | ||
BC017222.1 | 8 | 2657 | AAH17222.1 | |
BU625974.1 | 1 | 207 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv469579 | Chr.5:179757830 - 179933191 on Build GRCh38 | Loss | RNF130 MIR1229 LTC4S SQSTM1 TBC1D9B LOC100996419 MGAT4B MAML1 C5orf45 |
More Information
Set Membership: |
Intragenic Exonic Non-exonic DGV Variation |