Assay Details
Target Gene Details
Entrez Gene ID: | 100616459 |
Gene Name: | microRNA 4745 |
Gene Aliases: |
mir-4745 |
Location: |
Chr.19:804940-805001 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MIR4745 | NR_039900.2 |
Target Gene Details
Entrez Gene ID: | 5725 |
Gene Name: | polypyrimidine tract binding protein 1 |
Gene Aliases: |
HNRNP-I, HNRNPI, HNRPI, PTB, PTB-1, PTB-T, PTB2, PTB3, PTB4, pPTB |
Location: |
Chr.19:797392-812327 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 8 - Exon 9 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PTBP1 | NM_002819.4 | NP_002810.1 | ||
NM_031990.3 | NP_114367.1 | |||
NM_031991.3 | NP_114368.1 | |||
XM_005259597.2 | XP_005259654.1 | |||
XM_005259598.2 | XP_005259655.1 | |||
AB208910.1 | BAD92147.1 | |||
BC002397.2 | AAH02397.1 | |||
BC004383.1 | AAH04383.1 | |||
BC013694.1 | AAH13694.1 | |||
BQ068293.1 | ||||
BT006819.1 | AAP35465.1 | |||
X60648.1 | CAA43056.1 | |||
X62006.1 | CAA43973.1 | |||
X65371.1 | CAA46443.1 | |||
X65372.1 | CAA46444.1 | |||
X66975.1 | CAA47386.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3643372 | Chr.19:794878 - 807625 on Build GRCh38 | Gain | MIR4745 PTBP1 |
dgv134n111 | Chr.19:607984 - 967584 on Build GRCh38 | Deletion | R3HDM4 MIR3187 MIR4745 RNU6-9 FGF22 PTBP1 PRTN3 KISS1R AZU1 PLPPR3 PALM RNF126 ARID3A MISP CFD LOC101928450 HCN2 PRSS57 FSTL3 MED16 ELANE POLRMT |
nsv828353 | Chr.19:775335 - 812296 on Build GRCh38 | Loss | LOC101928450 MIR4745 PTBP1 |
nsv578167 | Chr.19:797079 - 850574 on Build GRCh38 | Loss | MIR3187 MIR4745 PTBP1 PRTN3 AZU1 PLPPR3 |
nsv828354 | Chr.19:796933 - 815173 on Build GRCh38 | Gain | MIR3187 MIR4745 PTBP1 PLPPR3 |
nsv953938 | Chr.19:355801 - 1104501 on Build GRCh38 | Deletion | R3HDM4 GPX4 ARHGAP45 GRIN3B POLR2E MIR3187 RNU6-9 CDC34 TPGS1 LOC105372235 PTBP1 PRTN3 ABCA7 BSG PALM RNF126 GZMM MISP PRSS57 RNU6-2 FSTL3 MADCAM1 ODF3L2 POLRMT MIR4745 WDR18 FGF22 KISS1R CNN2 AZU1 PLPPR3 ARID3A THEG CFD LOC101928450 SHC2 HCN2 TMEM259 MED16 ELANE C2CD4C |
nsv470101 | Chr.19:401714 - 1008505 on Build GRCh38 | Loss | R3HDM4 GRIN3B MIR3187 RNU6-9 CDC34 TPGS1 LOC105372235 PTBP1 PRTN3 BSG PALM RNF126 GZMM MISP PRSS57 FSTL3 MADCAM1 ODF3L2 POLRMT MIR4745 WDR18 FGF22 KISS1R AZU1 PLPPR3 ARID3A CFD LOC101928450 SHC2 HCN2 MED16 ELANE C2CD4C |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |