Assay Details
Target Gene Details
Entrez Gene ID: | 55911 |
Gene Name: | apolipoprotein B receptor |
Gene Aliases: |
APOB100R, APOB48R |
Location: |
Chr.16:28494649-28498970 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
APOBR | NM_018690.3 | 2 | 1346 | NP_061160.3 |
AF141332.1 | 3 | 1296 | AAF76255.1 | |
AF141334.1 | 3 | 1296 | AAF78765.1 | |
BC119786.1 | 3 | 1296 | ||
BC119788.1 | 3 | 1091 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv509608 | Chr.16:28449797 - 28632895 on Build GRCh38 | Insertion | NUPR1 SGF29 APOBR IL27 CLN3 SULT1A2 SULT1A1 |
esv2758640 | Chr.16:28163817 - 29139232 on Build GRCh38 | Gain+Loss | LAT NFATC2IP APOBR TUFM CLN3 MIR6862-1 ATXN2L SPNS1 XPO6 NPIPB6 ATP2A1 IL27 RRN3P2 SULT1A2 SH2B1 EIF3C NUPR1 NPIP MIR4517 SBK1 LOC101928215 SGF29 EIF3CL NPIPB9 CD19 ATP2A1-AS1 NPIPB8 RABEP2 SULT1A1 MIR6862-2 MIR4721 |
nsv1059555 | Chr.16:28373144 - 29195838 on Build GRCh38 | Gain | LAT NFATC2IP APOBR TUFM CLN3 MIR6862-1 ATXN2L SPNS1 ATP2A1 IL27 LOC107984832 RRN3P2 SULT1A2 SH2B1 EIF3C NUPR1 NPIP MIR4517 LOC101928215 SGF29 EIF3CL NPIPB9 CD19 ATP2A1-AS1 NPIPB8 RABEP2 SULT1A1 MIR6862-2 MIR4721 |
nsv833180 | Chr.16:28346157 - 28574165 on Build GRCh38 | Loss | NPIPB6 NUPR1 SGF29 EIF3CL APOBR IL27 CLN3 MIR6862-1 |
nsv9415 | Chr.16:28468881 - 28498959 on Build GRCh38 | Gain | APOBR CLN3 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |