Assay Details
Target Gene Details
Entrez Gene ID: | 9328 |
Gene Name: | general transcription factor IIIC subunit 5 |
Gene Aliases: |
TFIIIC63, TFIIICepsilon, TFiiiC2-63 |
Location: |
Chr.9:133030675-133058503 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 4 - Exon 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GTF3C5 | NM_001122823.1 | NP_001116295.1 | ||
NM_001286709.1 | NP_001273638.1 | |||
NM_012087.3 | NP_036219.2 | |||
XM_005272234.3 | XP_005272291.1 | |||
XM_011519201.1 | XP_011517503.1 | |||
XM_017015315.1 | XP_016870804.1 | |||
XM_017015316.1 | XP_016870805.1 | |||
AF133124.1 | AAD41476.1 | |||
AJ420443.1 | ||||
AK000194.1 | BAA91001.1 | |||
AK024510.1 | ||||
AK055092.1 | ||||
AK097295.1 | BAC04993.1 | |||
AK225761.1 | ||||
AK293980.1 | ||||
AK311481.1 | ||||
AY007123.1 | AAG01991.1 | |||
BC009741.2 | AAH09741.2 | |||
BC011355.1 | AAH11355.1 | |||
BC017337.2 | AAH17337.1 | |||
BC030157.2 | AAH30157.2 | |||
BQ673969.1 |
Target Gene Details
Entrez Gene ID: | 102465528 |
Gene Name: | microRNA 6877 |
Gene Aliases: |
hsa-mir-6877 |
Location: |
Chr.9:133051996-133052059 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MIR6877 | NR_106937.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2739138 | Chr.9:132727483 - 135521553 on Build GRCh38 | Deletion | SNORD36B MIR3689C RXRA MIR548AW SURF4 LOC101928193 LOC105376306 MIR4669 MIR3689F SNORD24 ADAMTS13 LCN1 FCN2 TMEM8C COL5A1 LOC401557 C9orf116 C9orf62 GTF3C5 OBP2B MED22 PPP1R26-AS1 LOC100996574 ADAMTSL2 SNORD36A SLC2A6 LINC00094 SURF1 MIR3689D2 SNORD141A SURF6 TSC1 MIR3689E FAM163B STKLD1 DBH-AS1 SPACA9 MIR6877 COL5A1-AS1 FCN1 VAV2 RALGDS REXO4 LOC101928525 PPP1R26 MIR3689D1 SURF2 CEL RNU6ATAC MIR3689B MIR3689A GBGT1 BRD3 RPL7A CACFD1 MRPS2 ABO SNORD36C AK8 GFI1B LOC100130548 CELP WDR5 DBH LOC101448202 OLFM1 SARDH |
nsv6746 | Chr.9:133044293 - 133068877 on Build GRCh38 | Insertion | GTF3C5 LOC100996574 MIR6877 CEL |
nsv615596 | Chr.9:133030314 - 133080285 on Build GRCh38 | Loss | GTF3C5 LOC100996574 MIR6877 CEL LOC105376306 |
nsv831744 | Chr.9:132980050 - 133174043 on Build GRCh38 | Gain+Loss | GTF3C5 LOC100996574 MIR6877 CEL SNORD141A LOC105376306 RALGDS GFI1B GBGT1 CELP |
nsv508564 | Chr.9:133013830 - 133073076 on Build GRCh38 | Deletion | GTF3C5 LOC100996574 MIR6877 CEL SNORD141A LOC105376306 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |