Assay Details
Target Gene Details
Entrez Gene ID: | 10522 |
Gene Name: | DEAF1, transcription factor |
Gene Aliases: |
MRD24, NUDR, SPN, ZMYND5 |
Location: |
Chr.11:644220-695754 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
DEAF1 | NM_001293634.1 | 1 | 257 | NP_001280563.1 |
NM_021008.3 | 1 | 257 | NP_066288.2 | |
AK291383.1 | ||||
BI463261.1 | 1 | 121 | ||
BM696110.1 | 1 | 243 | ||
HY094363.1 | 1 | 257 |
Target Gene Details
Entrez Gene ID: | 283232 |
Gene Name: | transmembrane protein 80 |
Gene Aliases: |
- |
Location: |
Chr.11:695386-705028 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TMEM80 | XM_017017600.1 | 1 | 113 | XP_016873089.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3625074 | Chr.11:669311 - 702135 on Build GRCh38 | Loss | DEAF1 TMEM80 |
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | LMNTD2 RASSF7 MUC2 POLR2L MIR210 RPLP2 RNH1 CD151 DEAF1 LOC101927503 SNORA52 SCT MUC5B LOC143666 IRF7 PIDD1 DRD4 ANO9 CEND1 LOC101059906 LOC171391 MUC5AC CRACR2B PKP3 SIGIRR PDDC1 MIR6744 TALDO1 TOLLIP TSPAN4 LRRC56 PTDSS2 TMEM80 B4GALNT4 CDHR5 AP2A2 PANO1 CHID1 EPS8L2 PHRF1 MIR210HG SLC25A22 HRAS PNPLA2 MUC6 |
nsv832043 | Chr.11:631027 - 758602 on Build GRCh38 | Loss | DRD4 DEAF1 TMEM80 EPS8L2 TALDO1 |
esv2759794 | Chr.11:409846 - 1336162 on Build GRCh38 | Loss | LMNTD2 RASSF7 MUC2 POLR2L MIR210 RPLP2 RNH1 CD151 DEAF1 LOC101927503 SNORA52 SCT MUC5B TOLLIP-AS1 LOC143666 IRF7 PIDD1 DRD4 ANO9 CEND1 LOC101059906 LOC171391 MUC5AC CRACR2B SIGIRR PDDC1 MIR6744 TALDO1 TOLLIP TSPAN4 LRRC56 PTDSS2 TMEM80 CDHR5 AP2A2 PANO1 CHID1 EPS8L2 PHRF1 MIR210HG SLC25A22 HRAS PNPLA2 MUC6 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | LMNTD2 RASSF7 POLR2L MIR210 RPLP2 RNH1 CD151 DEAF1 SNORA52 SCT LOC143666 IRF7 PIDD1 DRD4 ANO9 CEND1 LOC101059906 LOC171391 CRACR2B PKP3 SIGIRR PDDC1 TALDO1 TSPAN4 LRRC56 PTDSS2 TMEM80 B4GALNT4 CDHR5 AP2A2 PANO1 CHID1 EPS8L2 PHRF1 MIR210HG SLC25A22 HRAS PNPLA2 |
nsv1159791 | Chr.11:461793 - 909492 on Build GRCh38 | Deletion | LMNTD2 RASSF7 POLR2L MIR210 RPLP2 RNH1 CD151 DEAF1 SNORA52 SCT LOC143666 IRF7 PIDD1 DRD4 CEND1 LOC101059906 LOC171391 CRACR2B PDDC1 TALDO1 TSPAN4 LRRC56 PTDSS2 TMEM80 CDHR5 PANO1 CHID1 EPS8L2 PHRF1 MIR210HG SLC25A22 HRAS PNPLA2 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |