Assay Details
Target Gene Details
Entrez Gene ID: | 6095 |
Gene Name: | RAR related orphan receptor A |
Gene Aliases: |
NR1F1, ROR1, ROR2, ROR3, RZR-ALPHA, RZRA |
Location: |
Chr.15:60488284-61229303 on Build GRCh38 |
Assay Gene Location: | Within Exon 21 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
RORA | NM_002943.3 | 11 | 1907 | NP_002934.1 |
NM_134260.2 | 12 | 1931 | NP_599022.1 | |
NM_134261.2 | 11 | 1761 | NP_599023.1 | |
NM_134262.2 | 10 | 1602 | NP_599024.1 | |
XM_005254584.4 | 11 | 6222 | XP_005254641.1 | |
XM_011521874.1 | 10 | 1799 | XP_011520176.1 | |
XM_011521875.1 | 11 | 1631 | XP_011520177.1 | |
XM_011521877.2 | 10 | 1834 | XP_011520179.1 | |
XM_011521878.1 | 12 | 1673 | XP_011520180.1 | |
XM_011521879.2 | 8 | 1559 | XP_011520181.1 | |
XM_017022466.1 | 10 | 3623 | XP_016877955.1 | |
XM_017022467.1 | 10 | 3296 | XP_016877956.1 | |
BC008831.2 | 11 | 1684 | AAH08831.1 | |
BC100987.2 | 10 | 1552 | AAI00988.1 | |
BC100988.1 | 10 | 1552 | AAI00989.1 | |
BC100989.1 | 10 | 1552 | AAI00990.1 | |
BC100990.2 | 10 | 1552 | AAI00991.1 | |
U04897.1 | 11 | 1777 | AAA62658.1 | |
U04898.1 | 12 | 1864 | AAA62659.1 | |
U04899.1 | 11 | 1829 | AAA62660.1 |
Target Gene Details
Entrez Gene ID: | 101928784 |
Gene Name: | RORA antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.15:60479178-60630639 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
RORA-AS1 | NR_120339.1 | |||
NR_120340.1 | ||||
NR_120341.1 | ||||
NR_120342.1 | ||||
AW663525.1 | ||||
BI668481.1 | ||||
BX115309.1 | ||||
DA507239.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv569609 | Chr.15:60417705 - 60502450 on Build GRCh38 | Loss | ICE2 RORA RORA-AS1 |
nsv527607 | Chr.15:60454406 - 60507710 on Build GRCh38 | Loss | ICE2 RORA RORA-AS1 |
nsv525689 | Chr.15:60448642 - 60531218 on Build GRCh38 | Gain | ICE2 RORA RORA-AS1 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |