Assay Details
Target Gene Details
Entrez Gene ID: | 6472 |
Gene Name: | serine hydroxymethyltransferase 2 |
Gene Aliases: |
GLYA, HEL-S-51e, SHMT |
Location: |
Chr.12:57229573-57234935 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 13 - Exon 14 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv482992 | Chr.12:56206217 - 57706217 on Build GRCh38 | Gain+Loss | PIP4K2C NEMP1 KIF5A CS NXPH4 HSD17B6 BAZ2A HBCBP ARHGAP9 INHBC LRP1-AS MIP NABP2 SHMT2 NACA ANKRD52 SLC26A10 CNPY2 SLC39A5 GLS2 COQ10A GPR182 SNORA105C STAC3 TAC3 DCTN2 MARS MBD6 RDH16 PTGES3 RNF41 MIR1228 R3HDM2 RBMS2 SNORD59B PAN2 GLI1 DDIT3 OS9 MIR616 SPRYD4 ARHGEF25 LRP1 IL23A STAT6 TIMELESS SNORD59A SDR9C7 NAB2 DTX3 B4GALNT1 MIR6758 APOF LOC101927583 MYO1A INHBE ZBTB39 NDUFA4L2 ATP5B PRIM1 STAT2 |
nsv519293 | Chr.12:57189889 - 57243810 on Build GRCh38 | Loss | NXPH4 STAC3 LRP1 MIR1228 NDUFA4L2 SHMT2 |
nsv952189 | Chr.12:57127118 - 57245617 on Build GRCh38 | Deletion | NXPH4 STAC3 LRP1 MIR1228 LRP1-AS NDUFA4L2 SHMT2 |
dgv96n21 | Chr.12:57139199 - 57243810 on Build GRCh38 | Loss | NXPH4 STAC3 LRP1 MIR1228 LRP1-AS NDUFA4L2 SHMT2 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |