Assay Details
Target Gene Details
Entrez Gene ID: | 56114 |
Gene Name: | protocadherin gamma subfamily A, 1 |
Gene Aliases: |
PCDH-GAMMA-A1 |
Location: |
Chr.5:141330685-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA1 | NM_018912.2 | NP_061735.1 | ||
AF152318.1 | AAD43712.1 |
Target Gene Details
Entrez Gene ID: | 56113 |
Gene Name: | protocadherin gamma subfamily A, 2 |
Gene Aliases: |
PCDH-GAMMA-A2 |
Location: |
Chr.5:141338760-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA2 | NM_018915.3 | NP_061738.1 | ||
AF152322.1 | AAD43716.1 |
Target Gene Details
Entrez Gene ID: | 56112 |
Gene Name: | protocadherin gamma subfamily A, 3 |
Gene Aliases: |
PCDH-GAMMA-A3 |
Location: |
Chr.5:141344034-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA3 | NM_018916.3 | NP_061739.2 | ||
AB208927.1 | BAD92164.1 | |||
AF152323.1 | AAD43717.1 |
Target Gene Details
Entrez Gene ID: | 56111 |
Gene Name: | protocadherin gamma subfamily A, 4 |
Gene Aliases: |
PCDH-GAMMA-A4 |
Location: |
Chr.5:141355025-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA4 | NM_018917.3 | NP_061740.2 | ||
AF152324.1 | AAD43718.1 |
Target Gene Details
Entrez Gene ID: | 56104 |
Gene Name: | protocadherin gamma subfamily B, 1 |
Gene Aliases: |
PCDH-GAMMA-B1 |
Location: |
Chr.5:141350261-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB1 | NM_018922.2 | NP_061745.1 | ||
AF152330.1 | AAD43724.1 |
Target Gene Details
Entrez Gene ID: | 56103 |
Gene Name: | protocadherin gamma subfamily B, 2 |
Gene Aliases: |
PCDH-GAMMA-B2 |
Location: |
Chr.5:141360136-141512979 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB2 | NM_018923.2 | NP_061746.1 | ||
NM_032096.1 | NP_115267.1 | |||
AF152331.1 | AAD43725.1 | |||
AF152518.1 | AAD43778.1 | |||
BC101805.1 | 1 | 83 | AAI01806.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759382 | Chr.5:140777355 - 141449115 on Build GRCh38 | Gain | PCDHB3 PCDHGA10 TAF7 PCDHB14 PCDHB6 PCDHGB7 PCDHB17P PCDHB2 PCDHAC1 PCDHA13 PCDHGA1 PCDHA9 PCDHB4 PCDHB8 PCDHB18P PCDHGA9 PCDHB9 PCDHGA11 LOC101926905 PCDHGA2 PCDHB11 PCDHA3 PCDHGB6 PCDHB19P PCDHGA3 PCDHA8 PCDHGA4 PCDHGA6 PCDHGA12 PCDHA2 PCDHA4 PCDHGB3 PCDHB16 PCDHB10 PCDHA7 PCDHB5 PCDHGB8P PCDHA1 PCDHGA8 PCDHA12 PCDHB12 PCDHGB2 PCDHA10 PCDHB15 PCDHGB4 PCDHA11 PCDHGA5 PCDHGA7 PCDHAC2 PCDHB1 PCDHGB1 PCDHGB5 PCDHA5 SLC25A2 PCDHA6 PCDHB7 PCDHB13 |
esv3606982 | Chr.5:141352280 - 141361411 on Build GRCh38 | Loss | PCDHGB1 PCDHGB2 PCDHGA4 PCDHGA1 PCDHGA2 PCDHGA3 |
nsv599922 | Chr.5:141341879 - 141416532 on Build GRCh38 | Loss | PCDHGB2 PCDHGA10 PCDHGA9 PCDHGA4 PCDHGB4 PCDHGA5 PCDHGA7 PCDHGA6 PCDHGA2 PCDHGB3 PCDHGB1 PCDHGB5 PCDHGB6 PCDHGA1 PCDHGA3 PCDHGA8 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |