Assay Details
Target Gene Details
Entrez Gene ID: | 10522 |
Gene Name: | DEAF1, transcription factor |
Gene Aliases: |
MRD24, NUDR, SPN, ZMYND5 |
Location: |
Chr.11:644220-695754 on Build GRCh38 |
Assay Gene Location: | Within Exon 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
DEAF1 | NM_001293634.1 | 8 | 1888 | NP_001280563.1 |
NM_021008.3 | 10 | 2155 | NP_066288.2 | |
XM_011519842.2 | 10 | 1454 | XP_011518144.1 | |
AB209831.1 | 7 | 810 | BAD93068.1 | |
AF007165.1 | 10 | 1304 | AAB62704.1 | |
AF049459.1 | 10 | 1498 | AAC79676.1 | |
AF049460.1 | 11 | 1762 | AAC79677.1 | |
AF068892.1 | 10 | 1268 | AAC25714.1 | |
AF068893.1 | 10 | 1268 | AAC25715.1 | |
AF068894.1 | 10 | 1269 | AAC25716.1 | |
AF068895.1 | 10 | 1269 | AAC25717.1 | |
AF068896.1 | 10 | 1269 | AAC25718.1 | |
AF068897.1 | 10 | 1270 | AAC25719.1 | |
AK289873.1 | 10 | 1381 | ||
AK291383.1 | 10 | 1936 | ||
BC053322.1 | 10 | 1563 | AAH53322.1 | |
FJ985253.1 | 8 | 1324 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3625074 | Chr.11:669311 - 702135 on Build GRCh38 | Loss | TMEM80 DEAF1 |
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | PDDC1 POLR2L PHRF1 TMEM80 CDHR5 RASSF7 MUC6 MIR210HG CRACR2B PIDD1 HRAS LOC101927503 PNPLA2 TALDO1 ANO9 LOC171391 SIGIRR LOC143666 DEAF1 LOC101059906 DRD4 MUC5B MUC5AC TSPAN4 SCT AP2A2 PTDSS2 TOLLIP CD151 PANO1 SNORA52 SLC25A22 EPS8L2 MIR210 CHID1 CEND1 LRRC56 LMNTD2 PKP3 MUC2 MIR6744 B4GALNT4 RNH1 RPLP2 IRF7 |
nsv832043 | Chr.11:631027 - 758602 on Build GRCh38 | Loss | TALDO1 TMEM80 EPS8L2 DEAF1 DRD4 |
esv2759794 | Chr.11:409846 - 1336162 on Build GRCh38 | Loss | PDDC1 POLR2L PHRF1 TMEM80 CDHR5 RASSF7 MUC6 MIR210HG CRACR2B PIDD1 HRAS LOC101927503 PNPLA2 TALDO1 ANO9 LOC171391 SIGIRR LOC143666 DEAF1 LOC101059906 DRD4 MUC5B MUC5AC TSPAN4 SCT AP2A2 PTDSS2 TOLLIP CD151 PANO1 SNORA52 SLC25A22 EPS8L2 MIR210 CHID1 CEND1 LRRC56 TOLLIP-AS1 LMNTD2 MUC2 MIR6744 RNH1 RPLP2 IRF7 |
nsv1053964 | Chr.11:491334 - 692433 on Build GRCh38 | Gain | PHRF1 SCT PTDSS2 CDHR5 RASSF7 MIR210HG MIR210 HRAS LRRC56 LMNTD2 LOC143666 DEAF1 RNH1 LOC101059906 DRD4 IRF7 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | PDDC1 POLR2L PHRF1 TMEM80 CDHR5 RASSF7 MIR210HG CRACR2B PIDD1 HRAS PNPLA2 TALDO1 ANO9 LOC171391 SIGIRR LOC143666 DEAF1 LOC101059906 DRD4 TSPAN4 SCT AP2A2 PTDSS2 CD151 PANO1 SNORA52 SLC25A22 EPS8L2 MIR210 CHID1 CEND1 LRRC56 LMNTD2 PKP3 B4GALNT4 RNH1 RPLP2 IRF7 |
dgv1525n54 | Chr.11:647869 - 688312 on Build GRCh38 | Loss | DEAF1 |
nsv1159791 | Chr.11:461793 - 909492 on Build GRCh38 | Deletion | PDDC1 POLR2L PHRF1 TMEM80 CDHR5 RASSF7 MIR210HG CRACR2B PIDD1 HRAS PNPLA2 TALDO1 LOC171391 LOC143666 DEAF1 LOC101059906 DRD4 TSPAN4 SCT PTDSS2 CD151 PANO1 SNORA52 SLC25A22 EPS8L2 MIR210 CHID1 CEND1 LRRC56 LMNTD2 RNH1 RPLP2 IRF7 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |