Assay Details
Target Gene Details
Entrez Gene ID: | 4849 |
Gene Name: | CCR4-NOT transcription complex subunit 3 |
Gene Aliases: |
LENG2, NOT3, NOT3H |
Location: |
Chr.19:54137689-54155708 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 3 - Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CNOT3 | NM_014516.3 | NP_055331.1 | ||
XM_005278279.1 | XP_005278336.1 | |||
XM_005278280.2 | XP_005278337.1 | |||
XM_005278281.1 | XP_005278338.1 | |||
XM_005278282.2 | XP_005278339.1 | |||
XM_011526992.1 | XP_011525294.1 | |||
XM_011526993.2 | XP_011525295.1 | |||
AB014591.1 | ||||
AF180474.1 | AAF29828.1 | |||
AK160386.1 | BAD18729.1 | |||
AK300434.1 | ||||
BC016474.1 | AAH16474.1 | |||
BQ439042.1 | ||||
DB076207.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3644782 | Chr.19:54138064 - 54154026 on Build GRCh38 | Gain | CNOT3 |
nsv515623 | Chr.19:54102901 - 54179150 on Build GRCh38 | Loss | TMC4 CNOT3 PRPF31 LENG1 TFPT MBOAT7 NDUFA3 |
nsv953613 | Chr.19:54097214 - 54198733 on Build GRCh38 | Deletion | TMC4 OSCAR CNOT3 TSEN34 PRPF31 LENG1 TFPT MBOAT7 NDUFA3 |
esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion | TMC4 CNOT3 TARM1 MIR526A2 MIR523 CACNG7 LENG1 CACNG6 MIR527 MYADM MBOAT7 FAM90A27P MIR4752 ZNF813 LILRA5 ZNF677 MIR1323 MIR520G ZNF665 LILRB2 MIR519C MIR498 MIR512-1 MIR373 MIR518F MIR518A2 ZNF765 PRKCG NDUFA3 LOC105372457 VN1R2 MIR522 MIR518B MIR518E NLRP12 LILRB3 MIR519E MIR518D TSEN34 LILRB5 PRPF31 MIR521-1 MIR1283-1 MIR371A MIR519A2 BIRC8 MIR526B MIR515-1 MIR517B MIR518C DPRX MIR520E MIR515-2 MIR512-2 LOC284379 MIR372 MIR520H MIR519A1 MIR520F MIR518A1 MIR520B MIR1283-2 ZNF818P MIR519D ZNF331 TFPT VSTM1 MIR520A ZNF525 MIR520C MIR516A2 MIR519B ZNF761 MIR526A1 MIR935 MIR520D MIR517A ZNF845 MIR524 OSCAR CACNG8 MIR371B MIR516B1 MIR516A1 MIR521-2 MIR516B2 MIR517C TPM3P9 LILRA6 VN1R4 MIR525 RPS9 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |