Assay Details
Target Gene Details
Entrez Gene ID: | 100130950 |
Gene Name: | uncharacterized LOC100130950 |
Gene Aliases: |
- |
Location: |
Chr.17:5192084-5235636 on Build GRCh38 |
Assay Gene Location: | Within Intron 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LOC100130950 | NR_034082.1 | |||
AK021878.1 |
Target Gene Details
Entrez Gene ID: | 388325 |
Gene Name: | SLP adaptor and CSK interacting membrane protein |
Gene Aliases: |
C17orf87, UNQ5783 |
Location: |
Chr.17:5208920-5234860 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 2 - Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SCIMP | NM_001271842.1 | NP_001258771.1 | ||
NM_001319190.1 | NP_001306119.1 | |||
NM_207103.3 | NP_996986.1 | |||
XM_017024615.1 | XP_016880104.1 | |||
AK057142.1 | ||||
AK297035.1 | ||||
AK310145.1 | ||||
AY358809.1 | AAQ89169.1 | |||
BC127925.1 | ||||
BC130554.1 | ||||
BC130556.1 | ||||
BC144395.1 | ||||
DQ778084.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv574273 | Chr.17:4585589 - 5460332 on Build GRCh38 | Gain | LOC102724009 MINK1 ARRB2 LOC100130950 INCA1 SLC52A1 GLTPD2 CAMTA2 C1QBP ZNF232 KIF1C ENO3 RPAIN LOC400568 CXCL16 MIR6864 ZMYND15 TM4SF5 MIR6865 MED11 PELP1 CHRNE C17orf107 LOC107984973 RNF167 VMO1 SLC25A11 USP6 DHX33 PFN1 GP1BA SMTNL2 LOC101928000 ZFP3 SCIMP NUP88 PLD2 LOC101559451 ALOX15 LOC101927979 SPAG7 RABEP1 PSMB6 ZNF594 |
dgv3089n100 | Chr.17:5187013 - 5327634 on Build GRCh38 | Gain | LOC100130950 SCIMP RABEP1 ZNF594 |
More Information
Additional Information:
For this assay, SNP(s) [rs74400579] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |