Assay Details
Target Gene Details
Entrez Gene ID: | 8036 |
Gene Name: | SHOC2, leucine rich repeat scaffold protein |
Gene Aliases: |
SIAA0862, SOC2, SUR8 |
Location: |
Chr.10:110919370-111013667 on Build GRCh38 |
Assay Gene Location: | Within Exon 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SHOC2 | NM_001269039.2 | 2 | 612 | NP_001255968.1 |
NM_001324336.1 | 2 | 569 | NP_001311265.1 | |
NM_001324337.1 | 3 | 797 | NP_001311266.1 | |
NM_007373.3 | 2 | 612 | NP_031399.2 | |
NR_136749.1 | ||||
XM_017016702.1 | 2 | 517 | XP_016872191.1 | |
XM_017016703.1 | 2 | 6334 | XP_016872192.1 | |
XM_017016704.1 | 2 | 516 | XP_016872193.1 | |
AB020669.1 | 2 | 540 | ||
AF054828.1 | 2 | 534 | AAC25698.1 | |
AF068920.1 | 1 | 263 | AAC39856.1 | |
AK292833.1 | 3 | 738 | ||
AK293271.1 | ||||
BC050445.1 | 1 | 467 | AAH50445.1 | |
BX649055.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv975n100 | Chr.10:110964401 - 111035401 on Build GRCh38 | Loss | SHOC2 MIR548E |
nsv1035602 | Chr.10:110876295 - 111021655 on Build GRCh38 | Loss | PDCD4 SHOC2 BBIP1 MIR4680 MIR548E RPL13AP6 |
esv3624545 | Chr.10:110948631 - 110987680 on Build GRCh38 | Loss | SHOC2 |
nsv831985 | Chr.10:110892331 - 111043345 on Build GRCh38 | Gain+Loss | PDCD4 SHOC2 BBIP1 MIR4680 MIR548E RPL13AP6 |
esv2674974 | Chr.10:110948807 - 110987520 on Build GRCh38 | Deletion | SHOC2 |
dgv974n100 | Chr.10:110924064 - 111035401 on Build GRCh38 | Loss | SHOC2 MIR548E RPL13AP6 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |