Assay Details
Target Gene Details
Entrez Gene ID: | 9328 |
Gene Name: | general transcription factor IIIC subunit 5 |
Gene Aliases: |
TFIIIC63, TFIIICepsilon, TFiiiC2-63 |
Location: |
Chr.9:133030675-133058503 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 2 - Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GTF3C5 | NM_001122823.1 | NP_001116295.1 | ||
NM_001286709.1 | NP_001273638.1 | |||
NM_012087.3 | NP_036219.2 | |||
XM_005272234.3 | XP_005272291.1 | |||
XM_011519201.1 | XP_011517503.1 | |||
XM_017015315.1 | XP_016870804.1 | |||
XM_017015316.1 | XP_016870805.1 | |||
AF133124.1 | AAD41476.1 | |||
AJ420443.1 | ||||
AK000194.1 | BAA91001.1 | |||
AK024510.1 | ||||
AK055092.1 | ||||
AK097295.1 | BAC04993.1 | |||
AK225761.1 | ||||
AK293980.1 | ||||
AK311481.1 | ||||
AY007123.1 | AAG01991.1 | |||
BC009741.2 | AAH09741.2 | |||
BC011355.1 | AAH11355.1 | |||
BC017337.2 | AAH17337.1 | |||
BC030157.2 | AAH30157.2 | |||
BQ673969.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2739138 | Chr.9:132727483 - 135521553 on Build GRCh38 | Deletion | COL5A1-AS1 RALGDS DBH-AS1 GTF3C5 ADAMTS13 MIR3689C ABO SARDH FCN1 FCN2 MIR3689D2 OLFM1 RPL7A LOC101928193 MIR4669 MIR548AW LOC401557 SLC2A6 LOC100130548 GFI1B LOC105376306 LOC101928525 C9orf116 SNORD36B ADAMTSL2 CELP REXO4 TSC1 MIR3689B MIR3689D1 BRD3 WDR5 LOC101448202 GBGT1 RNU6ATAC LCN1 MIR6877 C9orf62 LOC100996574 SNORD141A TMEM8C PPP1R26 SNORD24 MIR3689A SURF2 CACFD1 COL5A1 SNORD36C SURF4 SNORD36A MIR3689F RXRA PPP1R26-AS1 MRPS2 CEL STKLD1 DBH SPACA9 LINC00094 OBP2B SURF1 VAV2 AK8 SURF6 MED22 MIR3689E FAM163B |
nsv615596 | Chr.9:133030314 - 133080285 on Build GRCh38 | Loss | MIR6877 GTF3C5 LOC100996574 CEL LOC105376306 |
nsv831744 | Chr.9:132980050 - 133174043 on Build GRCh38 | Gain+Loss | RALGDS MIR6877 GTF3C5 CELP LOC100996574 GBGT1 SNORD141A CEL GFI1B LOC105376306 |
nsv508564 | Chr.9:133013830 - 133073076 on Build GRCh38 | Deletion | MIR6877 GTF3C5 LOC100996574 SNORD141A CEL LOC105376306 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |