Assay Details
Target Gene Details
Entrez Gene ID: | 6560 |
Gene Name: | solute carrier family 12 member 4 |
Gene Aliases: |
CTC-479C5.17, KCC1, hKCC1 |
Location: |
Chr.16:67943474-67968694 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 21 - Exon 22 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC12A4 | NM_001145961.1 | NP_001139433.1 | ||
NM_001145962.1 | NP_001139434.1 | |||
NM_001145963.1 | NP_001139435.1 | |||
NM_001145964.1 | NP_001139436.1 | |||
NM_005072.4 | NP_005063.1 | |||
AF047338.1 | AAC32815.1 | |||
AF054505.1 | AAC39684.1 | |||
AF054506.1 | AAC39685.1 | |||
AK026911.1 | ||||
AK097808.1 | ||||
AK293906.1 | ||||
AK293956.1 | ||||
AK299042.1 | ||||
AK302790.1 | ||||
AK316415.1 | ||||
AY026038.1 | AAK01946.1 | |||
BC021193.2 | AAH21193.1 | |||
U55054.1 | AAC50563.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv522852 | Chr.16:67153308 - 68071571 on Build GRCh38 | Gain | PLEKHG4 DPEP2 CARMIL2 NOL3 FBXL8 FHOD1 TRADD TPPP3 ENKD1 THAP11 ATP6V0D1 LOC100131303 LOC100505942 CENPT SLC12A4 EXOC3L1 HSF4 ACD FAM65A MIR328 DUS2 C16orf86 HSD11B2 SLC9A5 LOC105369155 AGRP PSKH1 LOC107984813 RANBP10 ELMO3 PARD6A LRRC29 LCAT GFOD2 NUTF2 PSMB10 CTCF EDC4 TMEM208 LRRC36 CTRL DPEP3 ZDHHC1 KIAA0895L DDX28 TSNAXIP1 NRN1L KCTD19 E2F4 |
nsv524363 | Chr.16:67136529 - 68071571 on Build GRCh38 | Loss | PLEKHG4 DPEP2 CARMIL2 NOL3 FBXL8 FHOD1 TRADD TPPP3 ENKD1 THAP11 ATP6V0D1 LOC100131303 LOC100505942 CENPT SLC12A4 EXOC3L1 HSF4 ACD B3GNT9 FAM65A MIR328 DUS2 C16orf86 HSD11B2 SLC9A5 LOC105369155 AGRP PSKH1 LOC107984813 RANBP10 ELMO3 PARD6A LRRC29 LCAT GFOD2 NUTF2 PSMB10 CTCF C16orf70 EDC4 TMEM208 LRRC36 CTRL DPEP3 ZDHHC1 KIAA0895L DDX28 TSNAXIP1 NRN1L KCTD19 E2F4 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |