Hs00625892_cn

• Gene Symbol: SSH2
• Assay Reference Genome Location: Chr.17:29629464 on build GRCh38
• Cytoband: 17q11.2

Target Gene Details

• Entrez Gene ID: 85464
• Gene Name: slingshot protein phosphatase 2
• Gene Aliases: SSH-2, SSH-2L
• Location: Chr.17:29625938-29930239 on Build GRCh38
• Assay Gene Location: Within Exon 24

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SSH2	NM_001282129.1	16	5958	NP_001269058.1
	NM_033389.3	15	5689	NP_203747.2
	XM_005258058.3	17	5851	XP_005258115.1
	XM_005258059.2	14	5825	XP_005258116.1
	XM_005258060.3	3	4418	XP_005258117.1
	XM_006722149.3	14	9456	XP_006722212.1
	XM_011525402.2	16	5686	XP_011523704.1
	XM_011525404.2	14	6449	XP_011523706.1
	XM_011525405.2	14	6497	XP_011523707.1
	XM_011525406.2	13	5776	XP_011523708.1
	XM_011525407.1	13	5521	XP_011523709.1
	XM_017025251.1	16	5894	XP_016880740.1
	XM_017025252.1	14	5755	XP_016880741.1
	AB051512.1	3	4507	BAB21816.1
	AB099290.1	15	5649	BAC97813.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833410	Chr.17:29607083 - 29776736 on Build GRCh38	Loss	SSH2 ANKRD13B CORO6
nsv833409	Chr.17:29465646 - 29655807 on Build GRCh38	Gain	TAOK1 SSH2 TP53I13 ANKRD13B GIT1 ABHD15 CORO6

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

protein phosphatase

Gene Ontology Categories:

Process(es)

protein dephosphorylation
regulation of actin polymerization or depolymerization
regulation of lamellipodium assembly
actin cytoskeleton organization
peptidyl-tyrosine dephosphorylation
regulation of axonogenesis

Function(s)

DNA binding
actin binding
phosphoprotein phosphatase activity
protein tyrosine phosphatase activity
protein tyrosine/serine/threonine phosphatase activity