Assay Details
Target Gene Details
Entrez Gene ID: | 201254 |
Gene Name: | stimulated by retinoic acid 13 |
Gene Aliases: |
CENP-X, CENPX, D9, FAAP10, MHF2 |
Location: |
Chr.17:82018703-82022930 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
STRA13 | NM_001271006.1 | 5 | 365 | NP_001257935.1 |
NM_001271007.1 | 4 | 296 | NP_001257936.1 | |
NM_144998.3 | 4 | 311 | NP_659435.2 | |
XM_005256339.2 | 5 | 517 | XP_005256396.1 | |
XM_017024326.1 | 3 | 718 | XP_016879815.1 | |
XM_017024327.1 | 4 | 590 | XP_016879816.1 | |
XM_017024328.1 | 4 | 459 | XP_016879817.1 | |
XM_017024329.1 | 3 | 405 | XP_016879818.1 | |
BC009571.1 | 4 | 280 | AAH09571.1 | |
BC011610.1 | 4 | 247 | AAH11610.1 | |
BI837753.1 | 4 | 279 | ||
BQ648002.1 | ||||
CB110145.1 | 5 | 374 | ||
HY110543.1 | 5 | 355 | ||
U95006.1 | 4 | 266 | AAB53638.1 | |
U95007.1 | 4 | 251 | AAB53639.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv952392 | Chr.17:81885825 - 82065724 on Build GRCh38 | Deletion | NOTUM STRA13 ANAPC11 MAFG-AS1 SIRT7 ASPSCR1 RFNG NPB RAC3 DCXR MAFG DUS1L GPS1 MYADML2 LRRC45 ALYREF PCYT2 PYCR1 |
nsv576183 | Chr.17:81991355 - 82086850 on Build GRCh38 | Loss | STRA13 DCXR DUS1L FASN ASPSCR1 GPS1 LRRC45 RFNG RAC3 |
nsv428351 | Chr.17:81152631 - 83064073 on Build GRCh38 | Gain | MRPL12 AATK SIRT7 PPP1R27 TSPAN10 NARF ASPSCR1 CD7 FN3K GCGR SLC25A10 LOC105371925 RAB40B ACTG1 DUS1L FSCN2 P4HB UTS2R SLC38A10 MYADML2 ALYREF PCYT2 STRA13 BAHCC1 C17orf89 LOC101929552 LOC105376791 LINC00482 ZNF750 NPB LOC101929511 NPLOC4 SECTM1 FN3KRP PDE6G MIR6787 MIR6786 B3GNTL1 MCRIP1 PYCR1 NOTUM TEPSIN FOXK2 ANAPC11 MIR4740 MAFG-AS1 HEXDC CSNK1D FASN C17orf62 FAAP100 SLC16A3 ARHGDIA CCDC57 MIR4525 CCDC137 MAFG ARL16 OXLD1 SNORD134 TEX19 AATK-AS1 TMEM105 TBCD HGS WDR45B CEP131 OGFOD3 RFNG LOC105376790 MIR3186 RAC3 DCXR LOC105371944 LOC100130370 GPS1 LRRC45 |
nsv470620 | Chr.17:81516973 - 82064485 on Build GRCh38 | Loss | NOTUM MRPL12 ANAPC11 MAFG-AS1 SIRT7 PPP1R27 TSPAN10 ASPSCR1 FAAP100 GCGR SLC25A10 ARHGDIA CCDC137 MAFG DUS1L ARL16 OXLD1 FSCN2 P4HB MYADML2 ALYREF PCYT2 STRA13 HGS RFNG NPB RAC3 NPLOC4 DCXR PDE6G GPS1 MIR6786 LRRC45 MCRIP1 PYCR1 |
dgv5800n54 | Chr.17:82013189 - 82035336 on Build GRCh38 | Loss | STRA13 ASPSCR1 LRRC45 RAC3 |
esv21913 | Chr.17:81828123 - 83103548 on Build GRCh38 | Gain+Loss | SIRT7 PPP1R27 NARF ASPSCR1 CD7 FN3K RAB40B DUS1L P4HB UTS2R MYADML2 ALYREF PCYT2 STRA13 LOC101929552 LOC105376791 ZNF750 NPB LOC101929511 SECTM1 FN3KRP MIR6787 B3GNTL1 MCRIP1 PYCR1 NOTUM FOXK2 ANAPC11 MAFG-AS1 HEXDC CSNK1D FASN C17orf62 SLC16A3 ARHGDIA CCDC57 MIR4525 METRNL MAFG SNORD134 TEX19 TBCD WDR45B OGFOD3 RFNG LOC105376790 RAC3 DCXR LOC105371944 GPS1 LRRC45 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |