Assay Details
Target Gene Details
Entrez Gene ID: | 100289580 |
Gene Name: | uncharacterized LOC100289580 |
Gene Aliases: |
- |
Location: |
Chr.16:88731180-88741425 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LOC100289580 | NR_103774.1 | |||
AK127064.1 | 1 | 91 | ||
AK294743.1 |
Target Gene Details
Entrez Gene ID: | 9780 |
Gene Name: | piezo type mechanosensitive ion channel component 1 |
Gene Aliases: |
DHS, FAM38A, LMPH3, Mib |
Location: |
Chr.16:88715338-88785220 on Build GRCh38 |
Assay Gene Location: | Within Intron 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PIEZO1 | NM_001142864.3 | NP_001136336.2 | ||
AA682915.1 | ||||
KC602455.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1063024 | Chr.16:88707330 - 89238482 on Build GRCh38 | Gain | LOC100289580 LOC100129697 CDT1 LOC101927793 LOC400558 LOC339059 TRAPPC2L LOC105371409 LOC107987238 ACSF3 CBFA2T3 CDH15 GALNS CTU2 PIEZO1 SLC22A31 ZNF778 PABPN1L LINC00304 APRT MIR4722 |
nsv471114 | Chr.16:88688461 - 88756339 on Build GRCh38 | Gain | CTU2 PIEZO1 LOC100289580 LOC339059 MIR4722 RNF166 |
nsv471113 | Chr.16:88650665 - 88764428 on Build GRCh38 | Loss | CTU2 PIEZO1 LOC100289580 LOC339059 CYBA SNAI3 SNAI3-AS1 MVD MIR4722 RNF166 |
dgv3064n100 | Chr.16:88683753 - 88846491 on Build GRCh38 | Gain | CTU2 PIEZO1 LOC100289580 CDT1 LOC339059 SNAI3 LOC107987238 SNAI3-AS1 APRT MIR4722 GALNS RNF166 |
nsv517643 | Chr.16:88713767 - 88756339 on Build GRCh38 | Loss | CTU2 PIEZO1 LOC100289580 LOC339059 MIR4722 |
nsv833327 | Chr.16:88667431 - 88757621 on Build GRCh38 | Loss | CTU2 PIEZO1 LOC100289580 LOC339059 SNAI3 SNAI3-AS1 MIR4722 RNF166 |
nsv952070 | Chr.16:88257295 - 88780192 on Build GRCh38 | Deletion | ZC3H18-AS1 LOC100289580 LOC339059 CYBA MVD ZFPM1 RNF166 CTU2 MIR5189 PIEZO1 IL17C SNAI3 ZC3H18 SNAI3-AS1 ZNF469 MIR4722 LOC107984862 |
nsv1927 | Chr.16:88712585 - 88743583 on Build GRCh38 | Insertion | CTU2 PIEZO1 LOC100289580 LOC339059 MIR4722 |
nsv1160442 | Chr.16:88708161 - 88778524 on Build GRCh38 | Deletion | CTU2 PIEZO1 LOC100289580 LOC339059 MIR4722 |
nsv482951 | Chr.16:88633593 - 90228345 on Build GRCh38 | Loss | LOC100289580 DBNDD1 LOC105371409 ACSF3 MC1R CBFA2T3 LOC101927817 PABPN1L APRT LOC107984817 VPS9D1 LOC100129697 LOC101927793 LOC400558 CHMP1A FAM157C PRDM7 DEF8 AFG3L1P DPEP1 SPG7 FANCA GAS8-AS1 GALNS RNF166 URAHP ZNF276 SNAI3-AS1 LINC00304 TUBB3 MIR4722 SPATA2L LOC105371414 LOC339059 CYBA SPIRE2 LOC105371419 VPS9D1-AS1 CTU2 SLC22A31 IL17C RPL13 CPNE7 ZNF778 LOC100287036 CENPBD1 TUBB8P7 CDT1 SPATA33 TRAPPC2L LOC107987238 MVD CDK10 CDH15 SNORD68 PIEZO1 SNAI3 ANKRD11 TCF25 GAS8 |
dgv3065n100 | Chr.16:88711587 - 88927172 on Build GRCh38 | Gain | LOC100289580 CDT1 LOC101927793 LOC339059 TRAPPC2L LOC107987238 CBFA2T3 GALNS CTU2 PIEZO1 PABPN1L APRT MIR4722 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |