Assay Details
Target Gene Details
Entrez Gene ID: | 59307 |
Gene Name: | single Ig and TIR domain containing |
Gene Aliases: |
IL-1R8, TIR8 |
Location: |
Chr.11:405716-417454 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SIGIRR | NM_001135053.1 | NP_001128525.1 | ||
NM_001135054.1 | NP_001128526.1 | |||
NM_021805.2 | NP_068577.2 | |||
XM_005253044.2 | XP_005253101.1 | |||
XM_005253045.1 | XP_005253102.1 | |||
XM_005253046.1 | XP_005253103.1 | |||
XM_005253048.4 | XP_005253105.1 | |||
XM_017018099.1 | XP_016873588.1 | |||
XM_017018100.1 | XP_016873589.1 | |||
AK025099.1 | BAB15066.1 | |||
AK093427.1 | ||||
AK172830.1 | BAD18795.1 | |||
BC003591.1 | AAH03591.1 | |||
BC025953.1 | AAH25953.1 | |||
BC106007.1 | AAI06008.1 | |||
BX369506.2 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv527327 | Chr.11:295343 - 620599 on Build GRCh38 | Loss | CDHR5 RASSF7 IFITM5 PHRF1 LOC143666 B4GALNT4 HRAS LRRC56 MIR210HG ANO9 PTDSS2 LMNTD2 IFITM2 SIGIRR MIR210 LOC101059906 IFITM3 PGGHG IFITM1 RNH1 IRF7 PKP3 |
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | MUC5B CDHR5 PHRF1 RPLP2 LOC143666 B4GALNT4 LOC101927503 SNORA52 LOC171391 EPS8L2 LRRC56 DEAF1 MUC6 MIR210HG MUC5AC TSPAN4 POLR2L LMNTD2 SLC25A22 SIGIRR TMEM80 IRF7 MUC2 RASSF7 TOLLIP CHID1 PDDC1 AP2A2 HRAS CD151 ANO9 PANO1 PTDSS2 PIDD1 SCT DRD4 PNPLA2 TALDO1 MIR6744 MIR210 LOC101059906 CEND1 RNH1 PKP3 CRACR2B |
nsv552776 | Chr.11:366710 - 432436 on Build GRCh38 | Loss | SIGIRR B4GALNT4 ANO9 PKP3 |
nsv951268 | Chr.11:368601 - 503700 on Build GRCh38 | Deletion | PTDSS2 SIGIRR B4GALNT4 RNH1 ANO9 PKP3 |
nsv552770 | Chr.11:356090 - 444628 on Build GRCh38 | Gain | SIGIRR B4GALNT4 ANO9 PKP3 |
dgv1505n54 | Chr.11:198510 - 470331 on Build GRCh38 | Gain | IFITM5 SIRT3 PSMD13 B4GALNT4 BET1L RIC8A ANO9 NLRP6 PTDSS2 IFITM2 SIGIRR MIR6743 ODF3 IFITM3 PGGHG IFITM1 PKP3 |
nsv1159790 | Chr.11:340219 - 491334 on Build GRCh38 | Deletion | PTDSS2 SIGIRR B4GALNT4 ANO9 PKP3 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | CDHR5 PHRF1 RPLP2 LOC143666 B4GALNT4 SNORA52 LOC171391 EPS8L2 LRRC56 DEAF1 MIR210HG TSPAN4 POLR2L LMNTD2 SLC25A22 SIGIRR TMEM80 IRF7 RASSF7 CHID1 PDDC1 AP2A2 HRAS CD151 ANO9 PANO1 PTDSS2 PIDD1 SCT DRD4 PNPLA2 TALDO1 MIR210 LOC101059906 CEND1 RNH1 PKP3 CRACR2B |
nsv552822 | Chr.11:403545 - 408352 on Build GRCh38 | Loss | SIGIRR PKP3 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |