Assay Details
Target Gene Details
Entrez Gene ID: | 10587 |
Gene Name: | thioredoxin reductase 2 |
Gene Aliases: |
SELZ, TR, TR-BETA, TR3, TRXR2 |
Location: |
Chr.22:19875518-19941992 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 19 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TXNRD2 | NM_006440.4 | NP_006431.2 | ||
AB019694.1 | BAA77601.2 | |||
AB019695.1 | BAA77602.2 | |||
AB209724.1 | BAD92961.1 | |||
AF044212.1 | AAD25167.1 | |||
AF106697.1 | AAD19597.1 | |||
AF166126.1 | AAF21431.1 | |||
AF166127.1 | AAF21432.1 | |||
AF171054.1 | AAD51324.1 | |||
AF201385.1 | AAG47635.1 | |||
AK094698.1 | ||||
AK097708.1 | ||||
BC007489.2 | AAH07489.3 | |||
R46611.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv834129 | Chr.22:19705617 - 19919068 on Build GRCh38 | Loss | SEPT5 TBX1 GP1BB TXNRD2 C22orf29 GNB1L SEPT5-GP1BB |
esv3893434 | Chr.22:19470889 - 20343372 on Build GRCh38 | Gain | MIR3618 TBX1 GP1BB ZDHHC8 CLDN5 MIR1286 COMT ARVCF LINC00895 LINC00896 RTN4R CDC45 TRMT2A MIR4761 TANGO2 MIR1306 C22orf29 RANBP1 LOC440792 CCDC188 UFD1L DGCR6L SEPT5 TXNRD2 LOC101927859 GNB1L MIR185 MIR6816 DGCR8 LOC284865 SEPT5-GP1BB |
nsv828939 | Chr.22:19696032 - 20324465 on Build GRCh38 | Loss | MIR3618 TBX1 GP1BB ZDHHC8 MIR1286 COMT ARVCF LINC00896 RTN4R TRMT2A MIR4761 TANGO2 MIR1306 C22orf29 RANBP1 LOC440792 CCDC188 DGCR6L SEPT5 TXNRD2 GNB1L MIR185 MIR6816 DGCR8 LOC284865 SEPT5-GP1BB |
nsv828938 | Chr.22:19691069 - 20324465 on Build GRCh38 | Gain | MIR3618 TBX1 GP1BB ZDHHC8 MIR1286 COMT ARVCF LINC00896 RTN4R TRMT2A MIR4761 TANGO2 MIR1306 C22orf29 RANBP1 LOC440792 CCDC188 DGCR6L SEPT5 TXNRD2 GNB1L MIR185 MIR6816 DGCR8 LOC284865 SEPT5-GP1BB |
nsv515664 | Chr.22:19873352 - 19892114 on Build GRCh38 | Loss | TXNRD2 |
nsv834130 | Chr.22:19837923 - 19940567 on Build GRCh38 | Loss | TXNRD2 C22orf29 GNB1L |
esv3568260 | Chr.22:19777375 - 19881883 on Build GRCh38 | Loss | TBX1 TXNRD2 C22orf29 GNB1L |
esv3647279 | Chr.22:19719848 - 19878980 on Build GRCh38 | Gain | SEPT5 TBX1 GP1BB TXNRD2 C22orf29 GNB1L SEPT5-GP1BB |
nsv953025 | Chr.22:19869078 - 19937977 on Build GRCh38 | Deletion | TXNRD2 |
dgv7983n54 | Chr.22:19762002 - 20321870 on Build GRCh38 | Gain | MIR3618 DGCR6L TBX1 TXNRD2 ZDHHC8 GNB1L MIR185 MIR6816 MIR1286 COMT ARVCF LINC00896 DGCR8 RTN4R LOC284865 TRMT2A MIR4761 TANGO2 MIR1306 C22orf29 RANBP1 LOC440792 CCDC188 |
esv3575418 | Chr.22:18161776 - 19963846 on Build GRCh38 | Gain | DGCR10 LOC102725072 TBX1 GP1BB DGCR9 USP18 LOC100996415 CLDN5 CLTCL1 COMT TMEM191B LINC00895 DGCR2 CDC45 MIR4761 DGCR6 C22orf29 TSSK2 GSC2 UFD1L GGT3P SEPT5 LOC729461 LINC01311 TXNRD2 RIMBP3 GNB1L HIRA SLC25A1 FAM230A DGCR14 LOC100996401 DGCR5 LOC642643 PI4KAP1 C22orf39 DGCR11 LOC100996432 SEPT5-GP1BB PRODH MRPL40 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |