Assay Details
Target Gene Details
Entrez Gene ID: | 83986 |
Gene Name: | family with sequence similarity 234 member A |
Gene Aliases: |
C16orf9, ITFG3, gs19 |
Location: |
Chr.16:234546-269943 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 14 - Intron 14 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
FAM234A | NM_001284497.1 | NP_001271426.1 | ||
NM_032039.3 | NP_114428.1 | |||
NR_104317.1 | ||||
XM_005255622.1 | XP_005255679.1 | |||
XM_005255623.2 | XP_005255680.1 | |||
XM_006720957.1 | XP_006721020.1 | |||
XM_011522691.1 | XP_011520993.1 | |||
XM_011522692.1 | XP_011520994.1 | |||
XM_017023760.1 | XP_016879249.1 | |||
XM_017023761.1 | XP_016879250.1 | |||
XM_017023762.1 | XP_016879251.1 | |||
XM_017023763.1 | XP_016879252.1 | |||
XM_017023764.1 | XP_016879253.1 | |||
XM_017023765.1 | XP_016879254.1 | |||
AK057165.1 | BAB71374.1 | |||
AK294581.1 | ||||
AL136542.1 | CAB66477.1 | |||
BC010521.1 | AAH10521.1 | |||
BC013047.1 | AAH13047.1 | |||
BC032112.2 | AAH32112.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | NHLRC4 PIGQ PDPK1 HAGH MIR6768 NME4 CACNA1H TPSG1 TBL3 MEIOB LOC105371046 SOX8 TRAF7 UBE2I LOC100287175 RPL3L FBXL16 RHBDF1 SNORD60 SLC9A3R2 GFER MIR6859-4 C16orf59 RPL23AP5 MPG SNHG19 EME2 RPUSD1 LMF1-AS1 ZNF598 NOXO1 MIR3180-5 HAGHL CCNF WFIKKN1 PTX4 FAM173A IFT140 AMDHD2 PDIA2 GNPTG MIR4516 TPSAB1 HN1L RGS11 MIR662 LINC00235 NPW NUBP2 LUC7L ABCA3 LOC105371184 CCDC154 ARHGDIG WDR90 PGP SYNGR3 NARFL IGFALS HS3ST6 BAIAP3 PRSS27 RNPS1 LOC100134368 TPSD1 AXIN1 NTHL1 JMJD8 LOC107984876 ABCA17P UNKL MIR3177 RAB26 NTN3 CRAMP1 SPSB3 RNF151 LOC652276 LOC105371049 SSTR5-AS1 C16orf91 LOC101929280 ERVK13-1 MIR3677 MRPS34 PKD1 HBA2 SNHG9 HBM LOC105371045 METTL26 LOC107987233 MIR4717 RHOT2 CEMP1 MSRB1 ECI1 CAPN15 SNORA78 LOC105371038 WASIR2 CCDC78 PRR25 WDR24 CHTF18 SSTR5 MIR940 PRR35 MIR3176 LOC106660606 STUB1 NME3 MIR1225 TMEM8A MIR6511B1 MRPL28 PRSS29P MLST8 MIR3178 KCTD5 CLCN7 LOC105371047 ATP6V0C LINC00254 MIR5587 TSC2 C1QTNF8 TBC1D24 METRN TSR3 TMEM204 TPSB2 MIR6767 FAM234A POLR3K NPRL3 RPS2 NDUFB10 DNASE1L2 HBA1 LOC729652 RAB40C SNRNP25 FAHD1 RHBDL1 MAPK8IP3 BRICD5 SNORA64 E4F1 DDX11L10 SNORA10 CASKIN1 DECR2 RAB11FIP3 HBZ MSLN LMF1 GNG13 TELO2 HBQ1 FLJ42627 MCRIP2 |
esv3570031 | Chr.16:243389 - 278107 on Build GRCh38 | Gain | FAM234A RGS11 |
esv3637563 | Chr.16:263248 - 505590 on Build GRCh38 | Gain | AXIN1 ARHGDIG TMEM8A RPL23AP5 MRPL28 NME4 PDIA2 FAM234A RGS11 LOC100134368 DECR2 RAB11FIP3 |
nsv827477 | Chr.16:262247 - 297639 on Build GRCh38 | Gain | AXIN1 ARHGDIG PDIA2 FAM234A RGS11 |
esv3637561 | Chr.16:261769 - 271795 on Build GRCh38 | Loss | FAM234A RGS11 |
dgv32n68 | Chr.16:245507 - 476226 on Build GRCh38 | Loss | AXIN1 ARHGDIG TMEM8A RPL23AP5 MRPL28 NME4 PDIA2 FAM234A RGS11 LOC100134368 DECR2 RAB11FIP3 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |