Assay Details
Target Gene Details
Entrez Gene ID: | 64223 |
Gene Name: | MTOR associated protein, LST8 homolog |
Gene Aliases: |
GBL, GbetaL, LST8, POP3, WAT1 |
Location: |
Chr.16:2205177-2209417 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 7 - Intron 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MLST8 | NM_001199173.1 | NP_001186102.1 | ||
NM_001199174.1 | NP_001186103.1 | |||
NM_001199175.1 | NP_001186104.1 | |||
NM_022372.4 | NP_071767.3 | |||
XM_005255475.3 | XP_005255532.2 | |||
XM_005255478.2 | XP_005255535.1 | |||
XM_005255479.2 | XP_005255536.1 | |||
XM_017023548.1 | XP_016879037.1 | |||
XM_017023549.1 | XP_016879038.1 | |||
XM_017023551.1 | XP_016879040.1 | |||
AF195883.1 | AAF04308.1 | |||
AK021536.1 | ||||
AK022227.1 | BAB13990.1 | |||
AK098762.1 | ||||
AK123195.1 | 1 | 711 | ||
AK302201.1 | ||||
AY223837.1 | AAO73410.1 | |||
BC001313.2 | AAH01313.1 | |||
BC017119.1 | AAH17119.1 | |||
BC052292.1 | AAH52292.1 | |||
BC088354.1 | AAH88354.1 | |||
BI761765.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | TPSAB1 RGS11 SOX8 RNF151 NPRL3 MCRIP2 POLR3K AMDHD2 LINC00235 SNORD60 PDPK1 PRSS29P HBQ1 HBM MIR940 PIGQ TMEM8A ABCA3 CCDC78 FBXL16 MIR3178 FLJ42627 WASIR2 PRSS27 PKD1 SSTR5 METTL26 WFIKKN1 RPUSD1 TSC2 C16orf91 MIR6859-4 HN1L PRR35 MIR1225 ZNF598 KCTD5 PTX4 NPW RPS2 ABCA17P MRPS34 RHBDL1 IFT140 LOC105371184 SSTR5-AS1 LOC100134368 ARHGDIG PGP WDR90 LUC7L HBA1 EME2 TELO2 NDUFB10 LINC00254 CHTF18 CACNA1H MIR3677 MSLN SLC9A3R2 BRICD5 RHOT2 CASKIN1 LMF1-AS1 TPSB2 DNASE1L2 TPSG1 GNPTG NTN3 FAHD1 LOC107984876 MLST8 UBE2I ERVK13-1 FAM234A SNRNP25 RHBDF1 MIR5587 LOC105371046 NUBP2 HS3ST6 RNPS1 TPSD1 SPSB3 RPL23AP5 MIR6511B1 MIR4516 HBZ LOC105371047 C1QTNF8 FAM173A LOC107987233 WDR24 HAGH CEMP1 HAGHL NTHL1 RAB11FIP3 MIR6768 MIR3180-5 MSRB1 SNHG9 METRN RAB26 MAPK8IP3 GNG13 MIR6767 JMJD8 MRPL28 MIR3176 CCDC154 LOC101929280 DDX11L10 MEIOB CCNF TBL3 ECI1 LOC729652 C16orf59 SNHG19 TBC1D24 TMEM204 NARFL AXIN1 PRR25 SNORA64 NHLRC4 NME4 MIR662 LOC105371038 NOXO1 BAIAP3 ATP6V0C SNORA10 LMF1 SYNGR3 DECR2 UNKL RAB40C RPL3L MIR4717 GFER STUB1 CLCN7 LOC105371045 TRAF7 LOC106660606 E4F1 MIR3177 HBA2 TSR3 LOC652276 PDIA2 NME3 SNORA78 CAPN15 MPG CRAMP1 LOC105371049 LOC100287175 IGFALS |
nsv471072 | Chr.16:1971892 - 2317508 on Build GRCh38 | Loss | RNPS1 TBL3 ECI1 NPW MIR6511B1 MIR4516 SNHG19 PGP SNORD60 NOXO1 MIR940 NTHL1 ABCA3 MIR3677 SYNGR3 SLC9A3R2 BRICD5 MIR4717 PKD1 MIR3180-5 CASKIN1 GFER TRAF7 DNASE1L2 LOC106660606 TSC2 E4F1 RAB26 MLST8 LOC105371049 MIR1225 ZNF598 |
dgv4861n54 | Chr.16:2083900 - 2246850 on Build GRCh38 | Loss | ECI1 BRICD5 PKD1 MIR3180-5 CASKIN1 MIR6511B1 MIR4516 SNHG19 TRAF7 DNASE1L2 TSC2 E4F1 RAB26 PGP SNORD60 MLST8 LOC105371049 MIR1225 |
dgv4863n54 | Chr.16:2141733 - 2274302 on Build GRCh38 | Loss | RNPS1 ECI1 BRICD5 CASKIN1 SNHG19 TRAF7 DNASE1L2 LOC106660606 E4F1 RAB26 PGP SNORD60 MLST8 MIR940 MIR3677 |
nsv1711 | Chr.16:2199093 - 2232650 on Build GRCh38 | Insertion | PGP BRICD5 MLST8 E4F1 |
nsv457351 | Chr.16:2156590 - 2274302 on Build GRCh38 | Loss | RNPS1 PGP ECI1 BRICD5 MLST8 CASKIN1 MIR940 TRAF7 DNASE1L2 LOC106660606 MIR3677 E4F1 |
nsv1052260 | Chr.16:2074546 - 2629655 on Build GRCh38 | Gain | RNPS1 CCNF ECI1 LOC729652 ABCA17P C16orf59 MIR6511B1 MIR4516 SNHG19 TBC1D24 AMDHD2 PGP SNORD60 PDPK1 CEMP1 ATP6V0C MIR940 ABCA3 MIR3677 MIR3178 MIR6768 BRICD5 MIR4717 PKD1 MIR3180-5 CASKIN1 TRAF7 DNASE1L2 LOC106660606 TSC2 E4F1 RAB26 NTN3 MIR6767 LOC652276 MLST8 LOC105371049 MIR1225 |
nsv952902 | Chr.16:2143400 - 2339999 on Build GRCh38 | Deletion | RNPS1 ECI1 BRICD5 MIR4717 CASKIN1 SNHG19 TRAF7 DNASE1L2 LOC106660606 E4F1 RAB26 PGP SNORD60 MLST8 MIR940 ABCA3 MIR3677 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |