Assay Details
Target Gene Details
Entrez Gene ID: | 9328 |
Gene Name: | general transcription factor IIIC subunit 5 |
Gene Aliases: |
TFIIIC63, TFIIICepsilon, TFiiiC2-63 |
Location: |
Chr.9:133030675-133058503 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 1 - Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GTF3C5 | NM_001122823.1 | NP_001116295.1 | ||
NM_001286709.1 | NP_001273638.1 | |||
NM_012087.3 | NP_036219.2 | |||
XM_005272234.3 | XP_005272291.1 | |||
XM_011519201.1 | XP_011517503.1 | |||
XM_017015315.1 | XP_016870804.1 | |||
XM_017015316.1 | XP_016870805.1 | |||
AF133124.1 | AAD41476.1 | |||
AJ420443.1 | ||||
AK000194.1 | BAA91001.1 | |||
AK055092.1 | ||||
AK097295.1 | BAC04993.1 | |||
AK225761.1 | ||||
AK293980.1 | ||||
AK311481.1 | ||||
AY007123.1 | AAG01991.1 | |||
BC011355.1 | AAH11355.1 | |||
BC017337.2 | AAH17337.1 | |||
BC030157.2 | AAH30157.2 | |||
BQ673969.1 | ||||
DB194811.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2739138 | Chr.9:132727483 - 135521553 on Build GRCh38 | Deletion | MIR3689C FCN1 LOC401557 GBGT1 GTF3C5 MIR3689F RXRA LCN1 REXO4 SNORD36A ADAMTSL2 CACFD1 SURF4 ABO SNORD141A SURF6 RPL7A SNORD24 FCN2 WDR5 MIR3689B CELP BRD3 COL5A1 OBP2B SNORD36C LOC100996574 CEL DBH-AS1 MIR3689A MIR6877 SPACA9 ADAMTS13 SLC2A6 SURF2 MIR548AW LINC00094 MIR3689D2 SNORD36B SURF1 C9orf116 MRPS2 OLFM1 DBH MIR3689E AK8 TSC1 FAM163B PPP1R26 MIR3689D1 STKLD1 VAV2 LOC105376306 LOC101448202 LOC101928525 RNU6ATAC C9orf62 LOC101928193 COL5A1-AS1 SARDH LOC100130548 RALGDS GFI1B MIR4669 TMEM8C PPP1R26-AS1 MED22 |
nsv615596 | Chr.9:133030314 - 133080285 on Build GRCh38 | Loss | LOC105376306 LOC100996574 CEL GTF3C5 MIR6877 |
nsv831744 | Chr.9:132980050 - 133174043 on Build GRCh38 | Gain+Loss | LOC105376306 LOC100996574 RALGDS CEL GFI1B GBGT1 CELP GTF3C5 MIR6877 SNORD141A |
nsv508564 | Chr.9:133013830 - 133073076 on Build GRCh38 | Deletion | LOC105376306 LOC100996574 CEL GTF3C5 MIR6877 SNORD141A |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |