Assay Details
Target Gene Details
Entrez Gene ID: | 10587 |
Gene Name: | thioredoxin reductase 2 |
Gene Aliases: |
SELZ, TR, TR-BETA, TR3, TRXR2 |
Location: |
Chr.22:19875518-19941992 on Build GRCh38 |
Assay Gene Location: | Within Exon 19 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TXNRD2 | NM_006440.4 | 18 | 1896 | NP_006431.2 |
AB019694.1 | 18 | 1707 | BAA77601.2 | |
AB019695.1 | 18 | 1801 | BAA77602.2 | |
AB209724.1 | 18 | 1674 | BAD92961.1 | |
AF044212.1 | 18 | 1717 | AAD25167.1 | |
AF106697.1 | 18 | 1896 | AAD19597.1 | |
AF166126.1 | 13 | 1781 | AAF21431.1 | |
AF166127.1 | 18 | 1801 | AAF21432.1 | |
AF171054.1 | 18 | 1714 | AAD51324.1 | |
AF201385.1 | 17 | 2936 | AAG47635.1 | |
AK094698.1 | 5 | 2483 | ||
AK097708.1 | 17 | 1632 | ||
BC007489.2 | 17 | 1591 | AAH07489.3 | |
BC117354.1 | 18 | 1676 | ||
R46611.1 | 1 | 232 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv834129 | Chr.22:19705617 - 19919068 on Build GRCh38 | Loss | SEPT5 C22orf29 TXNRD2 GNB1L TBX1 SEPT5-GP1BB GP1BB |
esv3893434 | Chr.22:19470889 - 20343372 on Build GRCh38 | Gain | RTN4R COMT ZDHHC8 GNB1L RANBP1 CLDN5 MIR1286 GP1BB ARVCF LINC00896 TRMT2A DGCR8 UFD1L TXNRD2 TBX1 MIR6816 MIR4761 MIR185 LOC101927859 MIR1306 LOC284865 TANGO2 CCDC188 SEPT5 DGCR6L C22orf29 CDC45 LINC00895 LOC440792 SEPT5-GP1BB MIR3618 |
nsv828939 | Chr.22:19696032 - 20324465 on Build GRCh38 | Loss | RTN4R COMT ZDHHC8 GNB1L RANBP1 MIR1286 GP1BB ARVCF LINC00896 TRMT2A DGCR8 TXNRD2 TBX1 MIR6816 MIR4761 MIR185 MIR1306 LOC284865 TANGO2 CCDC188 SEPT5 DGCR6L C22orf29 LOC440792 SEPT5-GP1BB MIR3618 |
nsv828938 | Chr.22:19691069 - 20324465 on Build GRCh38 | Gain | RTN4R COMT ZDHHC8 GNB1L RANBP1 MIR1286 GP1BB ARVCF LINC00896 TRMT2A DGCR8 TXNRD2 TBX1 MIR6816 MIR4761 MIR185 MIR1306 LOC284865 TANGO2 CCDC188 SEPT5 DGCR6L C22orf29 LOC440792 SEPT5-GP1BB MIR3618 |
nsv515664 | Chr.22:19873352 - 19892114 on Build GRCh38 | Loss | TXNRD2 |
nsv834130 | Chr.22:19837923 - 19940567 on Build GRCh38 | Loss | C22orf29 TXNRD2 GNB1L |
esv3568260 | Chr.22:19777375 - 19881883 on Build GRCh38 | Loss | C22orf29 TXNRD2 GNB1L TBX1 |
esv3647279 | Chr.22:19719848 - 19878980 on Build GRCh38 | Gain | SEPT5 C22orf29 TXNRD2 GNB1L TBX1 SEPT5-GP1BB GP1BB |
nsv953025 | Chr.22:19869078 - 19937977 on Build GRCh38 | Deletion | TXNRD2 |
dgv7983n54 | Chr.22:19762002 - 20321870 on Build GRCh38 | Gain | MIR4761 RTN4R MIR185 COMT ZDHHC8 GNB1L RANBP1 MIR1306 MIR1286 LOC284865 ARVCF TANGO2 CCDC188 LINC00896 TRMT2A DGCR8 DGCR6L C22orf29 TXNRD2 TBX1 LOC440792 MIR6816 MIR3618 |
esv3575418 | Chr.22:18161776 - 19963846 on Build GRCh38 | Gain | MRPL40 DGCR10 COMT GNB1L DGCR5 SLC25A1 CLDN5 LOC100996432 DGCR2 GP1BB GSC2 PRODH FAM230A C22orf39 DGCR11 LOC100996401 UFD1L LOC102725072 TXNRD2 TBX1 LINC01311 LOC100996415 USP18 MIR4761 LOC729461 RIMBP3 TMEM191B DGCR9 LOC642643 CLTCL1 GGT3P SEPT5 C22orf29 HIRA TSSK2 CDC45 DGCR14 LINC00895 SEPT5-GP1BB PI4KAP1 DGCR6 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |