Assay Details
Target Gene Details
Entrez Gene ID: | 56114 |
Gene Name: | protocadherin gamma subfamily A, 1 |
Gene Aliases: |
PCDH-GAMMA-A1 |
Location: |
Chr.5:141330685-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA1 | NM_018912.2 | NP_061735.1 | ||
AF152318.1 | AAD43712.1 |
Target Gene Details
Entrez Gene ID: | 56113 |
Gene Name: | protocadherin gamma subfamily A, 2 |
Gene Aliases: |
PCDH-GAMMA-A2 |
Location: |
Chr.5:141338760-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA2 | NM_018915.3 | NP_061738.1 | ||
AF152322.1 | AAD43716.1 |
Target Gene Details
Entrez Gene ID: | 56112 |
Gene Name: | protocadherin gamma subfamily A, 3 |
Gene Aliases: |
PCDH-GAMMA-A3 |
Location: |
Chr.5:141344034-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA3 | NM_018916.3 | NP_061739.2 | ||
AB208927.1 | BAD92164.1 | |||
AF152323.1 | AAD43717.1 |
Target Gene Details
Entrez Gene ID: | 56104 |
Gene Name: | protocadherin gamma subfamily B, 1 |
Gene Aliases: |
PCDH-GAMMA-B1 |
Location: |
Chr.5:141350261-141512979 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB1 | NM_018922.2 | 1 | 191 | NP_061745.1 |
NM_032095.1 | 1 | 191 | NP_115266.1 | |
AF152330.1 | 1 | 191 | AAD43724.1 | |
AF152517.1 | 1 | 191 | AAD43777.1 | |
BC103926.1 | 1 | 191 | AAI03927.1 | |
BC103927.1 | 1 | 191 | AAI03928.1 | |
BC103928.1 | 1 | 191 | AAI03929.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759382 | Chr.5:140777355 - 141449115 on Build GRCh38 | Gain | PCDHA1 PCDHA2 PCDHA13 PCDHB19P PCDHA6 PCDHGA7 PCDHB14 PCDHA4 PCDHGA6 PCDHB13 PCDHGA3 PCDHB17P PCDHA7 PCDHAC2 PCDHB18P PCDHGA8 PCDHGA12 PCDHB10 PCDHA9 PCDHB15 PCDHGB2 PCDHA10 PCDHGA9 PCDHGB5 SLC25A2 PCDHB9 TAF7 PCDHGB6 PCDHAC1 PCDHGA5 PCDHGB3 PCDHA8 PCDHGB4 PCDHB7 LOC101926905 PCDHGA10 PCDHGB8P PCDHGB1 PCDHGA1 PCDHA5 PCDHGA11 PCDHB3 PCDHA3 PCDHGA2 PCDHB4 PCDHB16 PCDHB5 PCDHB11 PCDHB2 PCDHB8 PCDHB6 PCDHGA4 PCDHA12 PCDHA11 PCDHGB7 PCDHB1 PCDHB12 |
nsv599922 | Chr.5:141341879 - 141416532 on Build GRCh38 | Loss | PCDHGA10 PCDHGA7 PCDHGB2 PCDHGB1 PCDHGA9 PCDHGB5 PCDHGA6 PCDHGA1 PCDHGA4 PCDHGA3 PCDHGB6 PCDHGA5 PCDHGB3 PCDHGA2 PCDHGA8 PCDHGB4 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |