Assay Details
Target Gene Details
Entrez Gene ID: | 22888 |
Gene Name: | U-box domain containing 5 |
Gene Aliases: |
RNF37, UBCE7IP5, UIP5, hUIP5 |
Location: |
Chr.20:3107573-3159910 on Build GRCh38 |
Assay Gene Location: | Within Exon 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
UBOX5 | NM_001267584.1 | 5 | 2503 | NP_001254513.1 |
NM_014948.3 | 5 | 2508 | NP_055763.1 | |
NM_199415.2 | 4 | 2346 | NP_955447.1 | |
AB020667.1 | 5 | 2476 | BAA74883.2 |
Target Gene Details
Entrez Gene ID: | 100134015 |
Gene Name: | UBOX5 antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.20:3106911-3150867 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 1 - Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
UBOX5-AS1 | NR_038395.1 | |||
AK097516.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv521437 | Chr.20:3107364 - 3110624 on Build GRCh38 | Loss | UBOX5-AS1 UBOX5 |
nsv585276 | Chr.20:3030542 - 3366307 on Build GRCh38 | Gain | GNRH2 AVP UBOX5-AS1 OXT SLC4A11 UBOX5 ITPA PTPRA C20orf194 LZTS3 DDRGK1 MRPS26 FASTKD5 |
nsv833897 | Chr.20:2990324 - 3175146 on Build GRCh38 | Loss | PTPRA GNRH2 AVP LZTS3 UBOX5-AS1 OXT MRPS26 FASTKD5 UBOX5 |
More Information
Additional Information:
For this assay, SNP(s) [rs201588299] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic Non-exonic DGV Variation |