Assay Details
Target Gene Details
Entrez Gene ID: | 55911 |
Gene Name: | apolipoprotein B receptor |
Gene Aliases: |
APOB100R, APOB48R |
Location: |
Chr.16:28494649-28498970 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
APOBR | NM_018690.3 | 2 | 2213 | NP_061160.3 |
AF141332.1 | 3 | 2163 | AAF76255.1 | |
AF141334.1 | 3 | 2163 | AAF78765.1 | |
AK025123.1 | 1 | 65 | ||
BC119786.1 | 3 | 2163 | ||
BC119788.1 | 3 | 1958 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv509608 | Chr.16:28449797 - 28632895 on Build GRCh38 | Insertion | SULT1A1 SULT1A2 SGF29 IL27 CLN3 NUPR1 APOBR |
esv2758640 | Chr.16:28163817 - 29139232 on Build GRCh38 | Gain+Loss | SULT1A1 ATXN2L NPIPB9 NUPR1 ATP2A1-AS1 SBK1 MIR4721 CD19 NPIP NFATC2IP LOC101928215 MIR6862-2 EIF3CL MIR4517 APOBR XPO6 RRN3P2 MIR6862-1 NPIPB6 ATP2A1 RABEP2 CLN3 SPNS1 SULT1A2 NPIPB8 SGF29 IL27 EIF3C LAT TUFM SH2B1 |
nsv1059555 | Chr.16:28373144 - 29195838 on Build GRCh38 | Gain | SULT1A1 ATXN2L NPIPB9 NUPR1 ATP2A1-AS1 LOC107984832 MIR4721 CD19 NPIP NFATC2IP LOC101928215 MIR6862-2 EIF3CL MIR4517 APOBR RRN3P2 MIR6862-1 ATP2A1 RABEP2 CLN3 SPNS1 SULT1A2 NPIPB8 SGF29 IL27 EIF3C LAT TUFM SH2B1 |
nsv833180 | Chr.16:28346157 - 28574165 on Build GRCh38 | Loss | MIR6862-1 NPIPB6 SGF29 IL27 CLN3 NUPR1 EIF3CL APOBR |
nsv9415 | Chr.16:28468881 - 28498959 on Build GRCh38 | Gain | CLN3 APOBR |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |