Assay Details
Target Gene Details
Entrez Gene ID: | 84310 |
Gene Name: | chromosome 7 open reading frame 50 |
Gene Aliases: |
YCR016W |
Location: |
Chr.7:978485-1138291 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
C7orf50 | NM_001134395.1 | NP_001127867.1 | ||
NM_001134396.1 | NP_001127868.1 | |||
NM_001318252.1 | NP_001305181.1 | |||
NM_032350.5 | NP_115726.1 | |||
XM_011515581.2 | XP_011513883.1 | |||
XM_011515582.2 | XP_011513884.1 | |||
XM_011515583.2 | XP_011513885.1 | |||
XM_011515584.2 | XP_011513886.1 | |||
XM_017012720.1 | XP_016868209.1 | |||
XM_017012721.1 | XP_016868210.1 | |||
XM_017012722.1 | XP_016868211.1 | |||
AF495721.1 | AAQ06675.1 | |||
AW137813.1 | ||||
BC006224.2 | AAH06224.1 | |||
BM763235.1 | ||||
CN261680.1 |
Target Gene Details
Entrez Gene ID: | 2852 |
Gene Name: | G protein-coupled estrogen receptor 1 |
Gene Aliases: |
CEPR, CMKRL2, DRY12, FEG-1, GPCR-Br, GPER, GPR30, LERGU, LERGU2, LyGPR, mER |
Location: |
Chr.7:1086807-1093815 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GPER1 | NM_001039966.1 | 3 | 1940 | NP_001035055.1 |
NM_001098201.1 | 2 | 1613 | NP_001091671.1 | |
NM_001505.2 | 2 | 1816 | NP_001496.1 | |
AB451427.1 | 1 | 1056 | ||
AF015257.1 | 2 | 1747 | AAC51904.1 | |
AK289588.1 | 2 | 1587 | ||
BC011634.1 | 1 | 1147 | AAH11634.1 | |
BC082766.1 | AAH82766.1 | |||
CR541655.1 | 1 | 1056 | CAG46456.1 | |
CR541741.1 | 1 | 1056 | CAG46541.1 | |
U58828.1 | 2 | 1002 | AAB02736.1 | |
U63917.1 | 2 | 1560 | AAB88017.1 | |
X98510.1 | 1 | 1229 | CAA67133.1 | |
Y08162.1 | 1 | 1056 | CAA69354.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv509183 | Chr.7:1040565 - 1097490 on Build GRCh38 | Insertion | LOC107986755 C7orf50 GPR146 GPER1 |
nsv605720 | Chr.7:977312 - 1121522 on Build GRCh38 | Loss | LOC107986755 C7orf50 CYP2W1 GPR146 GPER1 MIR339 |
nsv5612 | Chr.7:1075693 - 1110299 on Build GRCh38 | Insertion | C7orf50 GPER1 |
nsv1032992 | Chr.7:1063632 - 1263413 on Build GRCh38 | Gain | LOC107986755 LOC101927021 C7orf50 ZFAND2A UNCX GPER1 |
nsv830876 | Chr.7:1078011 - 1240568 on Build GRCh38 | Loss | LOC101927021 C7orf50 ZFAND2A UNCX GPER1 |
nsv605705 | Chr.7:947983 - 1211575 on Build GRCh38 | Loss | LOC107986755 LOC101927021 COX19 C7orf50 ZFAND2A CYP2W1 GPR146 GPER1 MIR339 ADAP1 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |