Assay Details
Target Gene Details
Entrez Gene ID: | 28952 |
Gene Name: | coiled-coil domain containing 22 |
Gene Aliases: |
CXorf37, JM1, RTSC2 |
Location: |
Chr.X:49235467-49250526 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 7 - Intron 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CCDC22 | NM_014008.4 | NP_054727.1 | ||
XM_005272599.3 | XP_005272656.1 | |||
AJ005890.1 | CAA06747.1 | |||
AK291976.1 | ||||
AK296911.1 | 7 | 1014 | ||
AK298264.1 | ||||
AK316375.1 | ||||
BC000972.2 | AAH00972.1 | |||
BC011675.2 | AAH11675.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv471602 | Chr.X:49205142 - 49320261 on Build GRCh38 | Gain | FOXP3 GAGE10 CCDC22 PPP1R3F CACNA1F |
nsv528292 | Chr.X:48433286 - 49274368 on Build GRCh38 | Gain | SLC38A5 CACNA1F SYP-AS1 MAGIX WDR45 WAS WDR13 PPP1R3F TIMM17B GLOD5 GRIPAP1 SLC35A2 KCND1 PORCN EBP HDAC6 PRAF2 GPKOW CCDC120 SUV39H1 FOXP3 CCDC22 RBM3 PCSK1N PIM2 ERAS TBC1D25 OTUD5 SYP LOC101927635 PQBP1 PLP2 FTSJ1 GATA1 TFE3 PRICKLE3 |
esv32909 | Chr.X:48003374 - 49285646 on Build GRCh38 | Gain+Loss | SSX3 SSX5 SSX4B SLC38A5 CACNA1F SYP-AS1 MAGIX WDR45 WAS WDR13 SSX9 PPP1R3F SPACA5 TIMM17B GLOD5 GRIPAP1 SLC35A2 KCND1 PORCN EBP SSX6 HDAC6 PRAF2 GPKOW CCDC120 SUV39H1 FOXP3 SPACA5B CCDC22 RBM3 PCSK1N PIM2 ERAS TBC1D25 ZNF630 OTUD5 SSX1 SYP ZNF630-AS1 LOC101927635 PQBP1 ZNF182 PLP2 FTSJ1 GATA1 TFE3 SSX4 PRICKLE3 |
nsv469734 | Chr.X:49205141 - 49320261 on Build GRCh38 | Gain+Loss | FOXP3 GAGE10 CCDC22 PPP1R3F CACNA1F |
nsv6895 | Chr.X:49227319 - 49262690 on Build GRCh38 | Insertion | FOXP3 CCDC22 CACNA1F |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |