Assay Details
Target Gene Details
Entrez Gene ID: | 56114 |
Gene Name: | protocadherin gamma subfamily A, 1 |
Gene Aliases: |
PCDH-GAMMA-A1 |
Location: |
Chr.5:141330685-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA1 | NM_018912.2 | NP_061735.1 | ||
AF152318.1 | AAD43712.1 |
Target Gene Details
Entrez Gene ID: | 56106 |
Gene Name: | protocadherin gamma subfamily A, 10 |
Gene Aliases: |
PCDH-GAMMA-A10 |
Location: |
Chr.5:141413176-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA10 | NM_018913.2 | NP_061736.1 | ||
AF152319.1 | AAD43713.1 |
Target Gene Details
Entrez Gene ID: | 56105 |
Gene Name: | protocadherin gamma subfamily A, 11 |
Gene Aliases: |
PCDH-GAMMA-A11 |
Location: |
Chr.5:141420970-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA11 | NM_018914.2 | NP_061737.1 | ||
NM_032092.1 | NP_114481.1 | |||
AF152320.1 | AAD43714.1 | |||
AF152504.1 | AAD43765.1 | |||
BC136781.1 | ||||
BC171774.1 |
Target Gene Details
Entrez Gene ID: | 26025 |
Gene Name: | protocadherin gamma subfamily A, 12 |
Gene Aliases: |
CDH21, FIB3, PCDH-GAMMA-A12 |
Location: |
Chr.5:141430591-141512979 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA12 | NM_003735.2 | 1 | 179 | NP_003726.1 |
NM_032094.1 | 1 | 179 | NP_115265.1 | |
AB011160.1 | 1 | 152 | ||
AF152321.1 | AAD43715.1 | |||
AF152506.1 | AAD43767.1 | |||
AL589367.1 | 1 | 206 | ||
AY358946.1 | 1 | 379 | AAQ89305.1 |
Target Gene Details
Entrez Gene ID: | 56113 |
Gene Name: | protocadherin gamma subfamily A, 2 |
Gene Aliases: |
PCDH-GAMMA-A2 |
Location: |
Chr.5:141338760-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA2 | NM_018915.3 | NP_061738.1 | ||
AF152322.1 | AAD43716.1 |
Target Gene Details
Entrez Gene ID: | 56112 |
Gene Name: | protocadherin gamma subfamily A, 3 |
Gene Aliases: |
PCDH-GAMMA-A3 |
Location: |
Chr.5:141344034-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA3 | NM_018916.3 | NP_061739.2 | ||
AB208927.1 | BAD92164.1 | |||
AF152323.1 | AAD43717.1 |
Target Gene Details
Entrez Gene ID: | 56111 |
Gene Name: | protocadherin gamma subfamily A, 4 |
Gene Aliases: |
PCDH-GAMMA-A4 |
Location: |
Chr.5:141355025-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA4 | NM_018917.3 | NP_061740.2 | ||
AF152324.1 | AAD43718.1 |
Target Gene Details
Entrez Gene ID: | 56110 |
Gene Name: | protocadherin gamma subfamily A, 5 |
Gene Aliases: |
CDH-GAMMA-A5, ME3, PCDH-GAMMA-A5 |
Location: |
Chr.5:141364331-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA5 | NM_018918.2 | NP_061741.1 | ||
AF152325.1 | AAD43719.1 |
Target Gene Details
Entrez Gene ID: | 56109 |
Gene Name: | protocadherin gamma subfamily A, 6 |
Gene Aliases: |
PCDH-GAMMA-A6 |
Location: |
Chr.5:141374084-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA6 | NM_018919.2 | NP_061742.1 | ||
AB209178.1 | BAD92415.1 | |||
AF152326.1 | AAD43720.1 | |||
BC146651.1 |
Target Gene Details
Entrez Gene ID: | 56108 |
Gene Name: | protocadherin gamma subfamily A, 7 |
Gene Aliases: |
PCDH-GAMMA-A7 |
Location: |
Chr.5:141382739-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA7 | NM_018920.3 | NP_061743.1 | ||
AB208958.1 | BAD92195.1 | |||
AF152327.1 | AAD43721.1 |
Target Gene Details
Entrez Gene ID: | 9708 |
Gene Name: | protocadherin gamma subfamily A, 8 |
Gene Aliases: |
PCDH-GAMMA-A8 |
Location: |
Chr.5:141391916-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA8 | NM_032088.1 | NP_114477.1 | ||
AF152328.1 | AAD43722.1 |
Target Gene Details
Entrez Gene ID: | 56107 |
Gene Name: | protocadherin gamma subfamily A, 9 |
Gene Aliases: |
PCDH-GAMMA-A9 |
Location: |
Chr.5:141402953-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA9 | NM_018921.2 | NP_061744.1 | ||
AF152329.1 | AAD43723.1 |
Target Gene Details
Entrez Gene ID: | 56104 |
Gene Name: | protocadherin gamma subfamily B, 1 |
Gene Aliases: |
PCDH-GAMMA-B1 |
Location: |
Chr.5:141350261-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB1 | NM_018922.2 | NP_061745.1 | ||
AF152330.1 | AAD43724.1 |
Target Gene Details
Entrez Gene ID: | 56103 |
Gene Name: | protocadherin gamma subfamily B, 2 |
Gene Aliases: |
PCDH-GAMMA-B2 |
Location: |
Chr.5:141360136-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB2 | NM_018923.2 | NP_061746.1 | ||
AF152331.1 | AAD43725.1 |
Target Gene Details
Entrez Gene ID: | 56102 |
Gene Name: | protocadherin gamma subfamily B, 3 |
Gene Aliases: |
PCDH-GAMMA-B3 |
Location: |
Chr.5:141370264-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB3 | NM_018924.4 | NP_061747.2 | ||
AF152332.1 | AAD43726.1 | |||
BC150172.1 |
Target Gene Details
Entrez Gene ID: | 8641 |
Gene Name: | protocadherin gamma subfamily B, 4 |
Gene Aliases: |
CDH20, FIB2, PCDH-GAMMA-B4 |
Location: |
Chr.5:141387885-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB4 | NM_003736.2 | NP_003727.1 | ||
AF152333.1 | AAD43727.1 |
Target Gene Details
Entrez Gene ID: | 56101 |
Gene Name: | protocadherin gamma subfamily B, 5 |
Gene Aliases: |
PCDH-GAMMA-B5 |
Location: |
Chr.5:141398128-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB5 | NM_018925.2 | NP_061748.1 | ||
AF152334.1 | AAD43728.1 |
Target Gene Details
Entrez Gene ID: | 56100 |
Gene Name: | protocadherin gamma subfamily B, 6 |
Gene Aliases: |
PCDH-GAMMA-B6 |
Location: |
Chr.5:141408203-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB6 | NM_018926.2 | NP_061749.1 | ||
AF152335.1 | AAD43729.1 |
Target Gene Details
Entrez Gene ID: | 56099 |
Gene Name: | protocadherin gamma subfamily B, 7 |
Gene Aliases: |
ME6, PCDH-GAMMA-B7 |
Location: |
Chr.5:141417647-141512981 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB7 | NM_018927.3 | NP_061750.1 | ||
AF152336.1 | AAD43730.1 | |||
BC051788.2 | AAH51788.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759382 | Chr.5:140777355 - 141449115 on Build GRCh38 | Gain | PCDHGA3 PCDHB10 PCDHGA4 PCDHA12 SLC25A2 PCDHA3 PCDHGA5 PCDHA1 PCDHGA12 PCDHGB2 PCDHA2 PCDHGB5 PCDHB19P PCDHA5 PCDHGB6 PCDHB17P PCDHB16 PCDHGB1 TAF7 PCDHGA8 PCDHB13 PCDHA10 PCDHA11 PCDHB4 PCDHB18P PCDHB1 PCDHGB8P PCDHB3 PCDHB8 PCDHA4 PCDHB14 PCDHB12 PCDHGA9 PCDHGB7 PCDHB7 PCDHB2 PCDHA8 PCDHB5 PCDHB9 PCDHGA1 PCDHGB4 PCDHA6 PCDHGA10 PCDHGA2 PCDHAC1 PCDHGB3 PCDHB6 PCDHA7 PCDHA9 PCDHAC2 PCDHGA6 LOC101926905 PCDHA13 PCDHGA11 PCDHB11 PCDHGA7 PCDHB15 |
esv2730847 | Chr.5:141415403 - 141432967 on Build GRCh38 | Deletion | PCDHGB7 PCDHGB1 PCDHGA3 PCDHGA6 PCDHGA4 PCDHGA1 PCDHGA8 PCDHGA11 PCDHGB4 PCDHGA5 PCDHGA10 PCDHGA12 PCDHGA2 PCDHGB2 PCDHGA7 PCDHGB3 PCDHGB5 PCDHGB6 PCDHGB8P PCDHGA9 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |