Hs00340533_cn

• Gene Symbol: SS18
• Assay Reference Genome Location: Chr.18:26018044 on build GRCh38
• Cytoband: 18q11.2

Target Gene Details

• Entrez Gene ID: 6760
• Gene Name: SS18, nBAF chromatin remodeling complex subunit
• Gene Aliases: SSXT, SYT
• Location: Chr.18:26016253-26091217 on Build GRCh38
• Assay Gene Location: Within Exon 17

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SS18	NM_001007559.2	11	1645	NP_001007560.1
	NM_001308201.1	11	1620	NP_001295130.1
	NM_005637.3	10	1552	NP_005628.2
	XM_006722527.2	12	1671	XP_006722590.1
	XM_011526145.1	11	1613	XP_011524447.1
	XM_011526147.2	13	1896	XP_011524449.1
	XM_011526148.2	13	1883	XP_011524450.1
	XM_011526149.2	13	1908	XP_011524451.1
	XM_011526150.2	12	1768	XP_011524452.1
	XM_011526151.2	13	1897	XP_011524453.1
	XM_011526152.2	11	1675	XP_011524454.1
	AK289510.1
	AK296949.1	11	1603
	AK299082.1
	AK304305.1	11	1668
	AK316302.1
	X79201.1	10	1489	CAA55792.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3893078	Chr.18:25391998 - 26039471 on Build GRCh38	Gain	SS18

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

transcription cofactor

Gene Ontology Categories:

Process(es)

microtubule cytoskeleton organization
cell morphogenesis
transcription, DNA-templated
intracellular signal transduction
response to drug
positive regulation of transcription from RNA polymerase II promoter
ephrin receptor signaling pathway
neuronal stem cell population maintenance

Function(s)

protein binding
ligand-dependent nuclear receptor transcription coactivator activity