Assay Details
Target Gene Details
Entrez Gene ID: | 64223 |
Gene Name: | MTOR associated protein, LST8 homolog |
Gene Aliases: |
GBL, GbetaL, LST8, POP3, WAT1 |
Location: |
Chr.16:2205177-2209417 on Build GRCh38 |
Assay Gene Location: | Within Exon 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MLST8 | NM_001199173.1 | NP_001186102.1 | ||
NM_001199174.1 | NP_001186103.1 | |||
NM_001199175.1 | NP_001186104.1 | |||
NM_022372.4 | NP_071767.3 | |||
XM_005255475.3 | XP_005255532.2 | |||
XM_005255478.2 | XP_005255535.1 | |||
XM_005255479.2 | XP_005255536.1 | |||
XM_017023548.1 | XP_016879037.1 | |||
XM_017023549.1 | XP_016879038.1 | |||
XM_017023550.1 | XP_016879039.1 | |||
XM_017023551.1 | 5 | 774 | XP_016879040.1 | |
XM_017023552.1 | XP_016879041.1 | |||
AF195883.1 | AAF04308.1 | |||
AK021536.1 | ||||
AK022227.1 | BAB13990.1 | |||
AK098762.1 | ||||
AK302201.1 | ||||
AU121635.1 | ||||
AY223837.1 | AAO73410.1 | |||
BC001313.2 | AAH01313.1 | |||
BC017119.1 | AAH17119.1 | |||
BC052292.1 | AAH52292.1 | |||
BC088354.1 | AAH88354.1 | |||
BI761765.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | PRR35 WDR24 TMEM204 ERVK13-1 GFER HS3ST6 PKD1 ZNF598 MSRB1 TPSG1 LOC729652 RGS11 LOC105371047 CEMP1 MEIOB SSTR5 RAB40C MIR3177 NOXO1 LUC7L MCRIP2 WDR90 GNPTG AMDHD2 PGP HBQ1 NPW ATP6V0C TBL3 MIR4516 FLJ42627 RAB11FIP3 ECI1 NHLRC4 PDIA2 TELO2 CCNF LINC00254 RHBDL1 DNASE1L2 MIR3677 ARHGDIG SNORA78 HBZ C16orf59 LMF1 SLC9A3R2 RPUSD1 ABCA3 NARFL METRN POLR3K FAM173A MIR3178 MIR940 HN1L TSC2 E4F1 SPSB3 LINC00235 CACNA1H HBM MIR6859-4 MIR4717 RHBDF1 HAGH AXIN1 RHOT2 MIR3176 IFT140 SNHG19 DDX11L10 RPL3L RNF151 CRAMP1 NME4 HBA2 SOX8 JMJD8 UNKL KCTD5 RNPS1 MIR3180-5 STUB1 WFIKKN1 METTL26 CLCN7 LOC105371049 UBE2I MIR6511B1 MIR6768 PRR25 C16orf91 BRICD5 CCDC154 SNORD60 RPS2 FBXL16 MRPS34 NUBP2 LOC107987233 PDPK1 MRPL28 SNRNP25 LOC106660606 MSLN HBA1 PRSS29P TRAF7 MAPK8IP3 LOC652276 LOC105371184 HAGHL CAPN15 MIR662 LOC105371045 TSR3 LOC105371046 NME3 FAHD1 TPSAB1 RPL23AP5 DECR2 LOC101929280 NTHL1 FAM234A SNORA64 MPG PIGQ LOC100134368 C1QTNF8 TBC1D24 NTN3 NDUFB10 EME2 TPSB2 MLST8 RAB26 SNORA10 GNG13 LMF1-AS1 BAIAP3 LOC107984876 SNHG9 CASKIN1 IGFALS TPSD1 TMEM8A SYNGR3 LOC105371038 ABCA17P PTX4 MIR6767 CCDC78 SSTR5-AS1 MIR1225 WASIR2 CHTF18 MIR5587 LOC100287175 NPRL3 PRSS27 |
nsv471072 | Chr.16:1971892 - 2317508 on Build GRCh38 | Loss | RNPS1 MIR3180-5 GFER PKD1 ZNF598 LOC105371049 SLC9A3R2 ABCA3 NTHL1 MIR6511B1 BRICD5 MIR940 MLST8 SNORD60 NOXO1 TSC2 E4F1 RAB26 MIR4717 CASKIN1 PGP SYNGR3 NPW TBL3 MIR4516 SNHG19 LOC106660606 ECI1 MIR1225 TRAF7 DNASE1L2 MIR3677 |
dgv4861n54 | Chr.16:2083900 - 2246850 on Build GRCh38 | Loss | TSC2 E4F1 RAB26 MIR3180-5 CASKIN1 PKD1 LOC105371049 PGP MIR4516 SNHG19 MIR6511B1 ECI1 MIR1225 TRAF7 DNASE1L2 BRICD5 MLST8 SNORD60 |
dgv4863n54 | Chr.16:2141733 - 2274302 on Build GRCh38 | Loss | E4F1 RAB26 RNPS1 CASKIN1 PGP SNHG19 LOC106660606 ECI1 TRAF7 DNASE1L2 MIR3677 BRICD5 MIR940 MLST8 SNORD60 |
nsv1711 | Chr.16:2199093 - 2232650 on Build GRCh38 | Insertion | E4F1 BRICD5 MLST8 PGP |
nsv457351 | Chr.16:2156590 - 2274302 on Build GRCh38 | Loss | E4F1 LOC106660606 RNPS1 ECI1 TRAF7 CASKIN1 DNASE1L2 MIR3677 BRICD5 MIR940 MLST8 PGP |
nsv1052260 | Chr.16:2074546 - 2629655 on Build GRCh38 | Gain | RNPS1 MIR3180-5 C16orf59 PKD1 LOC105371049 ABCA3 LOC729652 CEMP1 MIR6511B1 MIR6768 MIR3178 TBC1D24 NTN3 BRICD5 MIR940 MLST8 SNORD60 TSC2 E4F1 RAB26 MIR4717 PDPK1 CASKIN1 AMDHD2 PGP ABCA17P ATP6V0C MIR6767 MIR4516 SNHG19 LOC106660606 ECI1 MIR1225 TRAF7 CCNF DNASE1L2 MIR3677 LOC652276 |
nsv952902 | Chr.16:2143400 - 2339999 on Build GRCh38 | Deletion | E4F1 RAB26 RNPS1 MIR4717 CASKIN1 PGP ABCA3 SNHG19 LOC106660606 ECI1 TRAF7 DNASE1L2 MIR3677 BRICD5 MIR940 MLST8 SNORD60 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |