Assay Details
Target Gene Details
Entrez Gene ID: | 59307 |
Gene Name: | single Ig and TIR domain containing |
Gene Aliases: |
IL-1R8, TIR8 |
Location: |
Chr.11:405716-417454 on Build GRCh38 |
Assay Gene Location: | Within Exon 8 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SIGIRR | NM_001135053.1 | 7 | 924 | NP_001128525.1 |
NM_001135054.1 | 7 | 997 | NP_001128526.1 | |
NM_021805.2 | 7 | 893 | NP_068577.2 | |
XM_005253044.2 | 7 | 997 | XP_005253101.1 | |
XM_005253045.1 | 7 | 893 | XP_005253102.1 | |
XM_005253046.1 | 7 | 981 | XP_005253103.1 | |
XM_005253048.4 | 5 | 687 | XP_005253105.1 | |
XM_017018099.1 | 7 | 997 | XP_016873588.1 | |
XM_017018100.1 | 6 | 826 | XP_016873589.1 | |
AK025099.1 | 7 | 893 | BAB15066.1 | |
AK093427.1 | 6 | 749 | ||
AK172830.1 | 7 | 893 | BAD18795.1 | |
AY358342.1 | 6 | 770 | AAQ88708.1 | |
BC003591.1 | 6 | 823 | AAH03591.1 | |
BC025953.1 | 7 | 852 | AAH25953.1 | |
BC106007.1 | 7 | 974 | AAI06008.1 | |
BX369506.2 | 2 | 92 | ||
CR457338.1 | 5 | 667 | CAG33619.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv527327 | Chr.11:295343 - 620599 on Build GRCh38 | Loss | MIR210HG IFITM1 ANO9 B4GALNT4 SIGIRR LOC101059906 CDHR5 PGGHG PKP3 HRAS LRRC56 RASSF7 IFITM2 PTDSS2 IFITM5 LOC143666 IRF7 RNH1 MIR210 PHRF1 LMNTD2 IFITM3 |
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | MIR210HG B4GALNT4 SIGIRR TOLLIP POLR2L LOC101059906 PANO1 PKP3 HRAS LRRC56 CD151 LOC143666 LOC171391 IRF7 MUC6 MUC2 DEAF1 LOC101927503 SNORA52 PDDC1 TSPAN4 MUC5B MUC5AC ANO9 MIR6744 CRACR2B RPLP2 DRD4 CDHR5 EPS8L2 CHID1 TALDO1 RASSF7 SCT PTDSS2 PNPLA2 TMEM80 PIDD1 SLC25A22 RNH1 AP2A2 MIR210 PHRF1 LMNTD2 CEND1 |
nsv552776 | Chr.11:366710 - 432436 on Build GRCh38 | Loss | ANO9 B4GALNT4 SIGIRR PKP3 |
nsv951268 | Chr.11:368601 - 503700 on Build GRCh38 | Deletion | PTDSS2 ANO9 B4GALNT4 SIGIRR RNH1 PKP3 |
nsv552770 | Chr.11:356090 - 444628 on Build GRCh38 | Gain | ANO9 B4GALNT4 SIGIRR PKP3 |
dgv1505n54 | Chr.11:198510 - 470331 on Build GRCh38 | Gain | IFITM1 NLRP6 ANO9 B4GALNT4 SIGIRR PGGHG PKP3 ODF3 SIRT3 IFITM2 MIR6743 PTDSS2 IFITM5 BET1L RIC8A PSMD13 IFITM3 |
nsv1159790 | Chr.11:340219 - 491334 on Build GRCh38 | Deletion | PTDSS2 ANO9 B4GALNT4 SIGIRR PKP3 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | MIR210HG B4GALNT4 SIGIRR POLR2L LOC101059906 PANO1 PKP3 HRAS LRRC56 CD151 LOC143666 LOC171391 IRF7 DEAF1 SNORA52 PDDC1 TSPAN4 ANO9 CRACR2B RPLP2 DRD4 CDHR5 EPS8L2 CHID1 TALDO1 RASSF7 SCT PTDSS2 PNPLA2 TMEM80 PIDD1 SLC25A22 RNH1 AP2A2 MIR210 PHRF1 LMNTD2 CEND1 |
nsv552822 | Chr.11:403545 - 408352 on Build GRCh38 | Loss | SIGIRR PKP3 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |