Assay Details
Target Gene Details
Entrez Gene ID: | 1942 |
Gene Name: | ephrin A1 |
Gene Aliases: |
B61, ECKLG, EFL1, EPLG1, LERK-1, LERK1, TNFAIP4 |
Location: |
Chr.1:155127873-155134910 on Build GRCh38 |
Assay Gene Location: | Within Exon 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
EFNA1 | NM_004428.2 | 5 | 689 | NP_004419.2 |
NM_182685.1 | 4 | 623 | NP_872626.1 | |
AK057845.1 | 5 | 1102 | ||
AK289589.1 | 4 | 620 | ||
AK313117.1 | ||||
AL833641.1 | 4 | 621 | ||
BC032698.1 | 5 | 682 | AAH32698.1 | |
BC095432.1 | 5 | 671 | AAH95432.1 | |
CR457416.1 | CAG33697.1 | |||
M57730.1 | 5 | 657 | AAA58388.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv509502 | Chr.1:154904407 - 155142291 on Build GRCh38 | Insertion | PYGO2 EFNA1 LENEP ZBTB7B CKS1B LOC100505666 DPM3 PBXIP1 ADAM15 FLAD1 EFNA3 DCST2 DCST1 LOC101928120 PMVK EFNA4 SHC1 MIR4258 SLC50A1 |
nsv547961 | Chr.1:155109822 - 155225189 on Build GRCh38 | Loss | THBS3 GBAP1 MTX1 EFNA1 MIR92B KRTCAP2 TRIM46 MUC1 SLC50A1 DPM3 |
nsv998756 | Chr.1:155107614 - 155164069 on Build GRCh38 | Gain | EFNA1 SLC50A1 DPM3 |
esv3587615 | Chr.1:155047853 - 155175013 on Build GRCh38 | Gain | ADAM15 EFNA1 KRTCAP2 TRIM46 EFNA3 DCST1 EFNA4 LOC100505666 SLC50A1 DPM3 |
dgv3n68 | Chr.1:155122502 - 155343618 on Build GRCh38 | Loss | GBAP1 RUSC1 RUSC1-AS1 EFNA1 MIR92B KRTCAP2 DPM3 SCAMP3 THBS3 MTX1 HCN3 TRIM46 CLK2 MUC1 PKLR FDPS LOC105371451 FAM189B GBA ASH1L SLC50A1 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |