Assay Details
Target Gene Details
Entrez Gene ID: | 83986 |
Gene Name: | family with sequence similarity 234 member A |
Gene Aliases: |
C16orf9, ITFG3, gs19 |
Location: |
Chr.16:234546-269943 on Build GRCh38 |
Assay Gene Location: | Within Exon 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
FAM234A | NM_001284497.1 | 3 | 473 | NP_001271426.1 |
NM_032039.3 | 3 | 480 | NP_114428.1 | |
NR_104317.1 | 3 | 480 | ||
XM_005255622.1 | 3 | 254 | XP_005255679.1 | |
XM_005255623.2 | 3 | 202 | XP_005255680.1 | |
XM_006720957.1 | 3 | 224 | XP_006721020.1 | |
XM_011522691.1 | 4 | 247 | XP_011520993.1 | |
XM_011522692.1 | 3 | 373 | XP_011520994.1 | |
XM_017023760.1 | 3 | 590 | XP_016879249.1 | |
XM_017023761.1 | 4 | 363 | XP_016879250.1 | |
XM_017023762.1 | 4 | 349 | XP_016879251.1 | |
XM_017023763.1 | 3 | 381 | XP_016879252.1 | |
XM_017023764.1 | 3 | 254 | XP_016879253.1 | |
XM_017023765.1 | 3 | 202 | XP_016879254.1 | |
AK057165.1 | 3 | 224 | BAB71374.1 | |
AK294581.1 | 3 | 192 | ||
AK310766.1 | ||||
AL136542.1 | 3 | 193 | CAB66477.1 | |
BC013047.1 | 2 | 173 | AAH13047.1 | |
BC032112.2 | 2 | 173 | AAH32112.1 | |
CN262982.1 | 3 | 480 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv518291 | Chr.16:47354 - 254515 on Build GRCh38 | Loss | SNRNP25 FAM234A HBQ1 RHBDF1 POLR3K HBA2 HBA1 LUC7L NPRL3 HBM MPG HBZ |
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | SNORD60 DECR2 RHBDF1 TPSAB1 HBA2 MAPK8IP3 MIR940 WDR24 LOC107987233 ERVK13-1 MIR3178 NPW NME3 LOC107984876 MIR1225 MLST8 CRAMP1 RNPS1 SPSB3 C16orf59 MIR6859-4 TELO2 MIR5587 TBC1D24 PDIA2 METRN MEIOB HN1L WFIKKN1 SYNGR3 LMF1 HBA1 NOXO1 NDUFB10 METTL26 SNORA78 IFT140 PKD1 MIR6768 PRR25 PDPK1 LOC101929280 FAHD1 GNG13 HBM HBZ MIR6511B1 MIR3677 RHOT2 IGFALS CHTF18 ABCA3 ECI1 CCDC154 TBL3 BAIAP3 UBE2I PRSS27 FAM234A TPSB2 TSR3 ABCA17P SLC9A3R2 RAB40C RAB26 LOC105371049 HS3ST6 PTX4 TSC2 CAPN15 PRSS29P CLCN7 WASIR2 WDR90 UNKL MIR3180-5 SNORA64 E4F1 LOC106660606 LINC00254 RPL3L CCDC78 RPUSD1 MIR3176 PRR35 C16orf91 ATP6V0C NUBP2 SNHG9 MIR3177 NTN3 RNF151 DDX11L10 DNASE1L2 CCNF LOC100134368 LOC105371184 CASKIN1 BRICD5 MRPS34 C1QTNF8 ZNF598 HAGHL GFER EME2 MSRB1 AMDHD2 RHBDL1 NPRL3 SSTR5 LINC00235 HBQ1 LOC105371046 LOC105371038 RGS11 FLJ42627 MSLN TMEM8A KCTD5 LOC729652 MCRIP2 TPSD1 SNRNP25 RPL23AP5 MRPL28 PGP MIR4516 SOX8 GNPTG JMJD8 LOC652276 NARFL SNHG19 AXIN1 MIR4717 PIGQ LMF1-AS1 TRAF7 LUC7L ARHGDIG FBXL16 MIR662 LOC105371045 HAGH RPS2 TMEM204 CEMP1 STUB1 FAM173A MIR6767 NME4 SSTR5-AS1 MPG LOC100287175 SNORA10 RAB11FIP3 NHLRC4 NTHL1 POLR3K LOC105371047 CACNA1H TPSG1 |
esv3570031 | Chr.16:243389 - 278107 on Build GRCh38 | Gain | FAM234A RGS11 |
nsv1044142 | Chr.16:10765 - 255644 on Build GRCh38 | Gain | WASIR2 HBQ1 RHBDF1 DDX11L10 HBA2 HBA1 LUC7L MPG SNRNP25 FAM234A POLR3K MIR6859-4 NPRL3 HBM HBZ |
dgv32n68 | Chr.16:245507 - 476226 on Build GRCh38 | Loss | PDIA2 DECR2 RAB11FIP3 RPL23AP5 FAM234A MRPL28 NME4 AXIN1 RGS11 ARHGDIG LOC100134368 TMEM8A |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |