Assay Details
Target Gene Details
Entrez Gene ID: | 1201 |
Gene Name: | CLN3, battenin |
Gene Aliases: |
BTS, JNCL |
Location: |
Chr.16:28466653-28492302 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 1 - Exon 1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv509608 | Chr.16:28449797 - 28632895 on Build GRCh38 | Insertion | CLN3 SGF29 NUPR1 IL27 APOBR SULT1A1 SULT1A2 |
esv2758640 | Chr.16:28163817 - 29139232 on Build GRCh38 | Gain+Loss | SH2B1 NPIPB6 IL27 CD19 NPIP CLN3 RABEP2 TUFM EIF3CL SBK1 APOBR NPIPB8 ATP2A1 RRN3P2 NPIPB9 MIR6862-2 ATXN2L MIR6862-1 EIF3C SPNS1 SULT1A1 SULT1A2 MIR4721 SGF29 LAT NFATC2IP NUPR1 ATP2A1-AS1 XPO6 MIR4517 LOC101928215 |
nsv1059555 | Chr.16:28373144 - 29195838 on Build GRCh38 | Gain | SH2B1 IL27 CD19 NPIP CLN3 RABEP2 TUFM EIF3CL APOBR NPIPB8 ATP2A1 RRN3P2 NPIPB9 MIR6862-2 LOC107984832 ATXN2L MIR6862-1 EIF3C SPNS1 SULT1A1 SULT1A2 MIR4721 SGF29 LAT NFATC2IP NUPR1 ATP2A1-AS1 MIR4517 LOC101928215 |
nsv833180 | Chr.16:28346157 - 28574165 on Build GRCh38 | Loss | CLN3 SGF29 NUPR1 NPIPB6 IL27 EIF3CL APOBR MIR6862-1 |
nsv9415 | Chr.16:28468881 - 28498959 on Build GRCh38 | Gain | CLN3 APOBR |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |