Assay Details
Target Gene Details
Entrez Gene ID: | 1201 |
Gene Name: | CLN3, battenin |
Gene Aliases: |
BTS, JNCL |
Location: |
Chr.16:28466653-28492302 on Build GRCh38 |
Assay Gene Location: | Within Exon 6 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv509608 | Chr.16:28449797 - 28632895 on Build GRCh38 | Insertion | SULT1A2 CLN3 IL27 NUPR1 APOBR SULT1A1 SGF29 |
esv2758640 | Chr.16:28163817 - 29139232 on Build GRCh38 | Gain+Loss | IL27 LOC101928215 ATP2A1-AS1 SPNS1 SULT1A1 SGF29 CD19 NPIPB8 SULT1A2 ATXN2L TUFM MIR4517 APOBR EIF3C NPIPB6 NPIPB9 EIF3CL MIR4721 CLN3 NUPR1 RABEP2 MIR6862-2 RRN3P2 ATP2A1 XPO6 NPIP LAT MIR6862-1 NFATC2IP SBK1 SH2B1 |
nsv1059555 | Chr.16:28373144 - 29195838 on Build GRCh38 | Gain | IL27 LOC101928215 ATP2A1-AS1 SPNS1 SULT1A1 SGF29 CD19 NPIPB8 SULT1A2 ATXN2L TUFM MIR4517 APOBR EIF3C NPIPB9 EIF3CL MIR4721 CLN3 NUPR1 RABEP2 MIR6862-2 RRN3P2 ATP2A1 NPIP LAT MIR6862-1 NFATC2IP LOC107984832 SH2B1 |
nsv833180 | Chr.16:28346157 - 28574165 on Build GRCh38 | Loss | CLN3 IL27 NUPR1 MIR6862-1 APOBR NPIPB6 EIF3CL SGF29 |
nsv9415 | Chr.16:28468881 - 28498959 on Build GRCh38 | Gain | CLN3 APOBR |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |