Assay Details
Target Gene Details
Entrez Gene ID: | 1201 |
Gene Name: | CLN3, battenin |
Gene Aliases: |
BTS, JNCL |
Location: |
Chr.16:28466653-28492302 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 2 - Exon 3 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv509608 | Chr.16:28449797 - 28632895 on Build GRCh38 | Insertion | SULT1A1 CLN3 SGF29 SULT1A2 NUPR1 IL27 APOBR |
esv2758640 | Chr.16:28163817 - 29139232 on Build GRCh38 | Gain+Loss | MIR6862-1 MIR4721 ATP2A1 CD19 ATP2A1-AS1 LAT EIF3C TUFM SULT1A2 NUPR1 IL27 APOBR ATXN2L MIR4517 SH2B1 RABEP2 NPIP XPO6 NPIPB6 NPIPB9 LOC101928215 NPIPB8 SULT1A1 CLN3 SGF29 RRN3P2 NFATC2IP SPNS1 MIR6862-2 EIF3CL SBK1 |
nsv1059555 | Chr.16:28373144 - 29195838 on Build GRCh38 | Gain | MIR6862-1 MIR4721 ATP2A1 CD19 ATP2A1-AS1 LAT EIF3C TUFM SULT1A2 NUPR1 IL27 APOBR ATXN2L MIR4517 SH2B1 RABEP2 NPIP NPIPB9 LOC107984832 LOC101928215 NPIPB8 SULT1A1 CLN3 SGF29 RRN3P2 NFATC2IP SPNS1 MIR6862-2 EIF3CL |
nsv833180 | Chr.16:28346157 - 28574165 on Build GRCh38 | Loss | MIR6862-1 CLN3 SGF29 NUPR1 NPIPB6 EIF3CL IL27 APOBR |
nsv9415 | Chr.16:28468881 - 28498959 on Build GRCh38 | Gain | CLN3 APOBR |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |