Assay Details
Target Gene Details
Entrez Gene ID: | 1201 |
Gene Name: | CLN3, battenin |
Gene Aliases: |
BTS, JNCL |
Location: |
Chr.16:28466653-28492302 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 5 - Exon 5 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv509608 | Chr.16:28449797 - 28632895 on Build GRCh38 | Insertion | APOBR SULT1A2 NUPR1 SULT1A1 IL27 SGF29 CLN3 |
esv2758640 | Chr.16:28163817 - 29139232 on Build GRCh38 | Gain+Loss | RABEP2 NPIP ATP2A1 SPNS1 SULT1A1 MIR6862-1 SULT1A2 ATXN2L SBK1 ATP2A1-AS1 IL27 NPIPB8 CD19 MIR6862-2 NUPR1 TUFM NFATC2IP MIR4517 NPIPB9 APOBR LOC101928215 XPO6 MIR4721 NPIPB6 EIF3CL LAT SH2B1 EIF3C RRN3P2 SGF29 CLN3 |
nsv1059555 | Chr.16:28373144 - 29195838 on Build GRCh38 | Gain | RABEP2 NPIP ATP2A1 SPNS1 SULT1A1 MIR6862-1 SULT1A2 ATXN2L ATP2A1-AS1 IL27 NPIPB8 LOC107984832 CD19 MIR6862-2 NUPR1 TUFM NFATC2IP MIR4517 NPIPB9 APOBR LOC101928215 MIR4721 EIF3CL LAT SH2B1 EIF3C RRN3P2 SGF29 CLN3 |
nsv833180 | Chr.16:28346157 - 28574165 on Build GRCh38 | Loss | APOBR NPIPB6 NUPR1 EIF3CL IL27 MIR6862-1 SGF29 CLN3 |
nsv9415 | Chr.16:28468881 - 28498959 on Build GRCh38 | Gain | APOBR CLN3 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |