Assay Details
Target Gene Details
Entrez Gene ID: | 1201 |
Gene Name: | CLN3, battenin |
Gene Aliases: |
BTS, JNCL |
Location: |
Chr.16:28466653-28492302 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 7 - Exon 8 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv509608 | Chr.16:28449797 - 28632895 on Build GRCh38 | Insertion | APOBR CLN3 SGF29 NUPR1 SULT1A1 SULT1A2 IL27 |
esv3638335 | Chr.16:28485966 - 28486958 on Build GRCh38 | Loss | CLN3 |
esv2673092 | Chr.16:28485953 - 28486973 on Build GRCh38 | Deletion | CLN3 |
esv2758640 | Chr.16:28163817 - 29139232 on Build GRCh38 | Gain+Loss | EIF3C SULT1A1 ATXN2L NPIPB9 MIR4721 MIR6862-2 NPIPB8 XPO6 SULT1A2 NPIP LAT MIR6862-1 IL27 APOBR CLN3 NUPR1 RABEP2 LOC101928215 RRN3P2 MIR4517 EIF3CL SPNS1 NPIPB6 ATP2A1-AS1 SGF29 NFATC2IP TUFM SBK1 SH2B1 ATP2A1 CD19 |
nsv1059555 | Chr.16:28373144 - 29195838 on Build GRCh38 | Gain | EIF3C LOC107984832 SULT1A1 ATXN2L NPIPB9 MIR4721 MIR6862-2 NPIPB8 SULT1A2 NPIP LAT MIR6862-1 IL27 APOBR CLN3 NUPR1 RABEP2 LOC101928215 RRN3P2 MIR4517 EIF3CL SPNS1 ATP2A1-AS1 SGF29 NFATC2IP TUFM SH2B1 ATP2A1 CD19 |
nsv833180 | Chr.16:28346157 - 28574165 on Build GRCh38 | Loss | APOBR CLN3 SGF29 NUPR1 EIF3CL MIR6862-1 NPIPB6 IL27 |
esv3553297 | Chr.16:28485875 - 28486958 on Build GRCh38 | Deletion | CLN3 |
nsv9415 | Chr.16:28468881 - 28498959 on Build GRCh38 | Gain | APOBR CLN3 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |