Hs07519409_cn

• Gene Symbol: LOC100506585
• Assay Reference Genome Location: Chr.7:157861693 on build GRCh38
• Cytoband: 7q36.3

Target Gene Details

• Entrez Gene ID: 100506585
• Gene Name: uncharacterized LOC100506585
• Gene Aliases: -
• Location: Chr.7:157854585-157866092 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC100506585	NR_038966.1

Target Gene Details

• Entrez Gene ID: 5799
• Gene Name: protein tyrosine phosphatase, receptor type N2
• Gene Aliases: IA-2beta, IAR, ICAAR, PTPRP, R-PTP-N2
• Location: Chr.7:157539052-158587802 on Build GRCh38
• Assay Gene Location: Within Intron 17

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PTPRN2	NM_001308267.1			NP_001295196.1
	NM_001308268.1			NP_001295197.1
	NM_002847.4			NP_002838.2
	NM_130842.3			NP_570857.2
	NM_130843.3			NP_570858.2
	XM_011516446.1			XP_011514748.1
	XM_017012475.1			XP_016867964.1
	XM_017012476.1			XP_016867965.1
	AB002385.2
	AF007555.1			AAB63600.1
	BC034040.1			AAH34040.1
	U65065.1			AAC51643.1
	U66702.1			AAC50742.1
	U81561.1			AAB68603.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv609247	Chr.7:157809604 - 157866004 on Build GRCh38	Loss	LOC100506585 PTPRN2
esv2422331	Chr.7:157663569 - 158061236 on Build GRCh38	Duplication	LOC100506585 PTPRN2
nsv509231	Chr.7:157805512 - 157908763 on Build GRCh38	Insertion	LOC100506585 PTPRN2
dgv64e213	Chr.7:157671716 - 158086766 on Build GRCh38	Gain	LOC100506585 PTPRN2
nsv831199	Chr.7:157812844 - 158023166 on Build GRCh38	Gain	LOC100506585 PTPRN2
nsv1032751	Chr.7:157737189 - 158042568 on Build GRCh38	Gain	LOC100506585 PTPRN2
esv2752150	Chr.7:157659832 - 158135832 on Build GRCh38	Gain	LOC100506585 PTPRN2
nsv428191	Chr.7:157557661 - 158063543 on Build GRCh38	Gain	LOC100506585 MIR153-2 PTPRN2 LOC105375614

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

protein phosphatase, protein modifying enzyme

Gene Ontology Categories:

Process(es)

protein dephosphorylation
neurotransmitter secretion
negative regulation of GTPase activity
peptidyl-tyrosine dephosphorylation
insulin secretion involved in cellular response to glucose stimulus

Function(s)

transmembrane receptor protein tyrosine phosphatase activity