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See other LSS CNV Assays ›
Gene Symbol
LSS
Assay Reference Genome
Location

Chr.21:46204473 on build GRCh38
Cytoband
21q22.3
Assay ID Hs04498881_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 4047

Gene Name:

 lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)

Gene Aliases:

 CTRCT44, OSC

Location:

 Chr.21:46188446-46228824 on Build GRCh38

Assay Gene Location:

 Within Intron 17
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LSS NM_001001438.2 NP_001001438.1
NM_001145436.1 NP_001138908.1
NM_001145437.1 NP_001138909.1
NM_002340.5 NP_002331.3
XM_011529564.2 XP_011527866.1
XM_011529565.1 XP_011527867.1
XM_011529566.2 XP_011527868.1
XM_011529567.2 XP_011527869.1
XM_017028346.1 XP_016883835.1
XM_017028347.1 XP_016883836.1
XM_017028348.1 XP_016883837.1
AK098352.1 BAC05289.1
AK226141.1
AK296313.1
AK312489.1
BC035638.1 AAH35638.1
D63807.1 BAA09875.1
S81221.1 AAB36220.1
X87809.1 CAA61078.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv519904 Chr.21:46163592 - 46461396 on Build GRCh38 Loss MCM3AP SPATC1L MCM3AP-AS1 YBEY C21orf58 LSS PCNT DIP2A
nsv1061087 Chr.21:46056174 - 46223305 on Build GRCh38 Loss SPATC1L LSS COL6A2 FTCD
nsv509804 Chr.21:45879599 - 46235140 on Build GRCh38 Insertion MCM3AP SPATC1L MCM3AP-AS1 COL6A1 LSS PCBP3 LOC101928796 COL6A2 FTCD
nsv1062031 Chr.21:46188666 - 46223305 on Build GRCh38 Gain LSS
nsv3546 Chr.21:46198359 - 46229316 on Build GRCh38 Insertion MCM3AP-AS1 LSS
nsv470910 Chr.21:45933861 - 46665076 on Build GRCh38 Gain SPATC1L S100B MCM3AP-AS1 PRMT2 YBEY C21orf58 LSS PCBP3 DIP2A COL6A2 FTCD DIP2A-IT1 MCM3AP COL6A1 PCNT LOC101928796
nsv1060978 Chr.21:46068159 - 46413726 on Build GRCh38 Gain MCM3AP SPATC1L MCM3AP-AS1 YBEY C21orf58 LSS PCNT COL6A2 FTCD

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

cyclase

Gene Ontology Categories:

Function(s) Process(es)


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