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See other NTHL1 CNV Assays ›
Gene Symbol
NTHL1
Assay Reference Genome
Location

Chr.16:2040503 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03935489_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 4913

Gene Name:

 nth-like DNA glycosylase 1

Gene Aliases:

 FAP3, NTH1, OCTS3, hNTH1

Location:

 Chr.16:2039815-2047872 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NTHL1 NM_001318193.1 NP_001305122.1
NM_001318194.1 NP_001305123.1
NM_002528.6 NP_002519.1
XM_017023253.1 XP_016878742.1
AB001575.1 BAA19413.1
BC000391.2 AAH00391.2
BC003014.1 AAH03014.1
BE900738.1
BG468617.1
U79718.1 AAB41534.1
U81285.1 AAC51136.1
Y09687.1 CAA70865.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication FAM173A SSTR5 DNASE1L2 NTN3 HBA2 IFT140 LMF1 SLC9A3R2 ATP6V0C MIR662 RPL23AP5 GNG13 CHTF18 SOX8 MIR3176 RHOT2 FAHD1 SNORD60 RPL3L MIR6859-4 METRN MSLN METTL26 NPW FLJ42627 RPUSD1 LINC00235 PGP LOC107984876 LOC106660606 PRSS27 MIR4516 HAGH PDPK1 LOC105371046 LOC107987233 TPSD1 LMF1-AS1 CCNF PDIA2 ECI1 PRR35 MLST8 TSC2 CACNA1H LOC100287175 ABCA17P IGFALS TMEM204 RHBDF1 LOC105371045 TBC1D24 TPSAB1 MIR6768 MIR6767 RAB40C PRSS29P GNPTG KCTD5 LOC105371038 CAPN15 JMJD8 LOC729652 LOC105371049 ERVK13-1 TBL3 ZNF598 SNORA64 TPSG1 CEMP1 MCRIP2 LINC00254 EME2 MIR940 HS3ST6 LUC7L RAB26 LOC100134368 MIR3677 TPSB2 NUBP2 TELO2 SNORA78 SNHG9 MIR4717 HBA1 RNPS1 MIR5587 LOC652276 AMDHD2 HBQ1 HN1L AXIN1 MPG CCDC78 GFER TMEM8A ARHGDIG MIR6511B1 DDX11L10 FAM234A SNHG19 WFIKKN1 WDR90 RAB11FIP3 SNRNP25 BRICD5 SSTR5-AS1 MAPK8IP3 MRPS34 MEIOB C1QTNF8 UNKL TSR3 MIR3180-5 MRPL28 FBXL16 POLR3K ABCA3 WASIR2 RGS11 CASKIN1 BAIAP3 NPRL3 SPSB3 SYNGR3 DECR2 NHLRC4 CLCN7 HBM CCDC154 NARFL PIGQ MSRB1 WDR24 CRAMP1 RHBDL1 E4F1 C16orf91 PKD1 NTHL1 LOC105371047 RPS2 MIR3178 NDUFB10 STUB1 LOC101929280 NOXO1 PTX4 SNORA10 HAGHL MIR3177 TRAF7 LOC105371184 NME4 RNF151 HBZ UBE2I MIR1225 PRR25 C16orf59 NME3
nsv471072 Chr.16:1971892 - 2317508 on Build GRCh38 Loss TBL3 MIR3180-5 ZNF598 ABCA3 DNASE1L2 MIR940 CASKIN1 RAB26 SLC9A3R2 SYNGR3 ECI1 MIR3677 MLST8 TSC2 MIR4717 RNPS1 E4F1 SNORD60 PKD1 NTHL1 GFER MIR6511B1 NOXO1 SNHG19 TRAF7 NPW PGP BRICD5 LOC106660606 LOC105371049 MIR1225 MIR4516
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion TBL3 ZNF598 SNORA64 PKD1 NTHL1 RPL3L RPS2 GFER NDUFB10 MIR6511B1 HS3ST6 NOXO1 SNORA10 SLC9A3R2 SYNGR3 SNORA78 TSC2 SNHG9 NPW RNF151 LOC105371049 MIR1225 MSRB1 MIR4516
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion TBL3 ZNF598 SNORA64 PKD1 NTHL1 RPS2 GFER NDUFB10 MIR6511B1 NOXO1 SNORA10 SLC9A3R2 SYNGR3 SNORA78 TSC2 SNHG9 NPW RNF151 LOC105371049 MIR1225

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