Genomic Map
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Target Gene Details
Entrez Gene ID: | 23293 |
Gene Name: | SMG6, nonsense mediated mRNA decay factor |
Gene Aliases: |
C17orf31, EST1A, SMG-6, hSMG5/7a |
Location: |
Chr.17:2059839-2303836 on Build GRCh38 |
Assay Gene Location: | Within Exon 30 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SMG6 | NM_001256827.1 | 12 | 2554 | NP_001243756.1 |
| NM_001256828.1 | 11 | 2311 | NP_001243757.1 | |
| NM_001282326.1 | 7 | 3313 | NP_001269255.1 | |
| NM_017575.4 | 19 | 5038 | NP_060045.4 | |
| XM_005256569.3 | 19 | 5236 | XP_005256626.1 | |
| XM_005256571.4 | 11 | 3621 | XP_005256628.1 | |
| XM_011523769.2 | 20 | 5226 | XP_011522071.1 | |
| XM_011523775.2 | 12 | 3630 | XP_011522077.1 | |
| XM_017024399.1 | 19 | 4096 | XP_016879888.1 | |
| AB018275.2 | 19 | 5075 | ||
| AK024131.1 | BAB14835.1 | |||
| AK074270.1 | 11 | 2300 | ||
| AK093007.1 | 1 | 1489 | ||
| AL080204.1 | 1 | 241 | ||
| AL133597.1 | 7 | 3313 | CAB63733.1 | |
| AY145883.1 | 19 | 4988 | AAN46114.1 | |
| BC064916.1 | 12 | 2554 | AAH64916.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv574216 | Chr.17:2036249 - 2161537 on Build GRCh38 | Gain |
 MIR132
SMG6
DPH1
HIC1
LOC107984987
MIR212
OVCA2
|
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Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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