Genomic Map
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Target Gene Details
Entrez Gene ID: | 23293 |
Gene Name: | SMG6, nonsense mediated mRNA decay factor |
Gene Aliases: |
C17orf31, EST1A, SMG-6, hSMG5/7a |
Location: |
Chr.17:2059839-2303836 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SMG6 | NM_017575.4 | NP_060045.4 | ||
| XM_005256570.3 | 1 | 120 | XP_005256627.1 | |
| XM_011523769.2 | 1 | 104 | XP_011522071.1 | |
| XM_011523772.2 | 1 | 120 | XP_011522074.1 | |
| XM_011523773.2 | 1 | 120 | XP_011522075.1 | |
| XM_011523774.2 | 1 | 120 | XP_011522076.1 | |
| XM_017024398.1 | 1 | 120 | XP_016879887.1 | |
| AB018275.2 | ||||
| AY145883.1 | AAN46114.1 |
Target Gene Details
Entrez Gene ID: | 63826 |
Gene Name: | serine racemase |
Gene Aliases: |
ILV1, ISO1 |
Location: |
Chr.17:2303371-2325267 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SRR | XM_006721565.3 | XP_006721628.1 | ||
| AY743705.1 | AAW66460.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv574224 | Chr.17:2269769 - 2423186 on Build GRCh38 | Gain |
 SRR
MNT
SNORD91A
LOC284009
METTL16
LOC101927864
SNORD91B
TSR1
SMG6
SGSM2
|
| nsv469765 | Chr.17:2213155 - 2400446 on Build GRCh38 | Loss |
SRR
MNT
SNORD91A
LOC101927864
SNORD91B
TSR1
SMG6
LOC101927839
SGSM2
|
| nsv833336 | Chr.17:2176922 - 2400456 on Build GRCh38 | Loss |
SRR
MNT
SNORD91A
LOC101927864
SNORD91B
TSR1
SMG6
LOC101927839
SGSM2
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Molecular Function -
RNA metabolism protein
epimerase/racemase
isomerase
metabolite interconversion enzyme
Gene Ontology Categories:
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