Hs01969863_cn

• Gene Symbol: SCLY
• Assay Reference Genome Location: Chr.2:238064459 on build GRCh38
• Cytoband: 2q37.3

Target Gene Details

• Entrez Gene ID: 51540
• Gene Name: selenocysteine lyase
• Gene Aliases: SCL, hSCL
• Location: Chr.2:238060924-238099413 on Build GRCh38
• Assay Gene Location: Overlaps Exon 2 - Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SCLY	NM_016510.5			NP_057594.4
	AB209458.2			BAD92695.1
	AF175767.1			AAF36816.1
	AK293283.1
	AK298409.1
	AK301009.1
	BC000586.2			AAH00586.2
	BC007891.2			AAH07891.1
	DN995828.1

Target Gene Details

• Entrez Gene ID: 100533179
• Gene Name: UBE2F-SCLY readthrough (NMD candidate)
• Gene Aliases: -
• Location: Chr.2:237966945-238099413 on Build GRCh38
• Assay Gene Location: Overlaps Exon 9 - Intron 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
UBE2F-SCLY	NR_037904.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv4193n100	Chr.2:237988669 - 238064519 on Build GRCh38	Gain	UBE2F-SCLY SCLY UBE2F
nsv1000252	Chr.2:235899999 - 238766417 on Build GRCh38	Loss	ACKR3 LRRFIP1 UBE2F-SCLY RAB17 GBX2 ASB1 COPS8 RAMP1 ESPNL UBE2F HES6 LOC105373958 LOC643387 RBM44 ILKAP LOC105373991 KLHL30 ERFE PRLH LOC151174 IQCA1 LOC93463 ASB18 MLPH MIR6811 LOC105373944 PER2 LINC01107 COL6A3 AGAP1 SCLY TRAF3IP1 LOC101927958

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

lyase, metabolite interconversion enzyme

Gene Ontology Categories:

Process(es)

selenium compound metabolic process
cellular amino acid metabolic process

Function(s)

protein binding
selenocysteine lyase activity
transferase activity